BLASTX nr result

ID: Coptis21_contig00026625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026625
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera]   129   2e-28
emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera]   119   2e-25
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   115   4e-24
prf||1510387A retrotransposon del1-46                                 114   1e-23
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]   114   1e-23

>emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera]
          Length = 1043

 Score =  129 bits (325), Expect = 2e-28
 Identities = 56/86 (65%), Positives = 72/86 (83%)
 Frame = -1

Query: 278  FRFGMKGKLAPRFVGPFPIIQKVGTVAYRLELPSQLQKVHNVFHVSMLRKYYPDPSHVID 99
            FRFG +GKLAPR+VGPF I+QK+G VAY+L LP QL  +H+VFHVSMLRKY PD +HV+D
Sbjct: 916  FRFGKRGKLAPRYVGPFEILQKIGEVAYKLALPPQLSGIHDVFHVSMLRKYEPDTTHVLD 975

Query: 98   WESLQLETDVSYEEGPVQVLDRREDI 21
            W+ L L+ DV+YEEGP Q+LD++E +
Sbjct: 976  WQDLNLQEDVTYEEGPRQILDKKEKV 1001


>emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera]
          Length = 506

 Score =  119 bits (299), Expect = 2e-25
 Identities = 52/86 (60%), Positives = 69/86 (80%)
 Frame = -1

Query: 278 FRFGMKGKLAPRFVGPFPIIQKVGTVAYRLELPSQLQKVHNVFHVSMLRKYYPDPSHVID 99
           FRFG   KLAPR++GPF IIQK+G VAY+L L  QL  +H+VFHVSML+KY PD +HV+D
Sbjct: 342 FRFGKMEKLAPRYIGPFEIIQKIGDVAYKLALLPQLSGIHDVFHVSMLQKYEPDTTHVLD 401

Query: 98  WESLQLETDVSYEEGPVQVLDRREDI 21
           W+ L L+ DV+YEEGP ++LD++E +
Sbjct: 402 WQDLNLQEDVTYEEGPREILDKKEQV 427


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/82 (59%), Positives = 70/82 (85%)
 Frame = -1

Query: 275  RFGMKGKLAPRFVGPFPIIQKVGTVAYRLELPSQLQKVHNVFHVSMLRKYYPDPSHVIDW 96
            RFG KGKL+P+F+GP+ I+ +VG VAYRL+LP+ L++VHNVFHVS LR+Y PD SHV++ 
Sbjct: 1400 RFGKKGKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLRRYVPDASHVLEP 1459

Query: 95   ESLQLETDVSYEEGPVQVLDRR 30
            E+++++  +SYEE PVQ+LDR+
Sbjct: 1460 ENVEIDETLSYEEKPVQILDRK 1481


>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/78 (64%), Positives = 61/78 (78%)
 Frame = -1

Query: 272  FGMKGKLAPRFVGPFPIIQKVGTVAYRLELPSQLQKVHNVFHVSMLRKYYPDPSHVIDWE 93
            F  KGKL+PR+ GPF I++ +  VAYRL LP  L  +HNVFH+SMLRKY PDPSH++DWE
Sbjct: 1321 FVFKGKLSPRYTGPFEILEIIWPVAYRLALPPMLSSIHNVFHISMLRKYEPDPSHILDWE 1380

Query: 92   SLQLETDVSYEEGPVQVL 39
             L+L  D+SYEE PVQVL
Sbjct: 1381 DLRLNPDISYEEKPVQVL 1398


>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
          Length = 596

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = -1

Query: 275 RFGMKGKLAPRFVGPFPIIQKVGTVAYRLELPSQLQKVHNVFHVSMLRKYYPDPSHVIDW 96
           RFG KGKL+PRFVGPF I+++VGT+AY++ LP  L KVHNVFHVS LRKY  DPSHV++ 
Sbjct: 465 RFGRKGKLSPRFVGPFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVEL 524

Query: 95  ESLQLETDVSYEEGPVQVLD 36
           E +Q+  D++YEE PVQ++D
Sbjct: 525 EPIQIFEDLTYEEVPVQIVD 544


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