BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026618
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   254   7e-66
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   244   7e-63
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   233   9e-60
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   208   3e-52
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   206   2e-51

>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  254 bits (648), Expect = 7e-66
 Identities = 119/151 (78%), Positives = 139/151 (92%), Gaps = 1/151 (0%)
 Frame = -2

Query: 451 MVFKGFVPDVVTYNCLIDACCKTYRIDRALELFDDMIRKGCLPNRITYNSFIRYYSAVNE 272
           M+FKGFVPDVVTYNCLID CCKTYRI+RALELFDDM ++GC+PNR+TYNSFIRYYSAVNE
Sbjct: 266 MLFKGFVPDVVTYNCLIDGCCKTYRIERALELFDDMNKRGCVPNRVTYNSFIRYYSAVNE 325

Query: 271 IDKAVEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLLELVNEGSVPREYTYK 92
           IDKAV+M+ +MK MNHGIPTTSSYTP+IHALCE GR+LEARDFL+ELV+ GSVPREYTYK
Sbjct: 326 IDKAVDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYK 385

Query: 91  LVCNALSAADEAS-LPDELRSRIEDGMEKRY 2
           +VC++L +A EA+ L DELR RIE+G+E RY
Sbjct: 386 VVCDSLRSAGEANMLGDELRGRIENGIENRY 416


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  244 bits (622), Expect = 7e-63
 Identities = 113/151 (74%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
 Frame = -2

Query: 451 MVFKGFVPDVVTYNCLIDACCKTYRIDRALELFDDMIRKGCLPNRITYNSFIRYYSAVNE 272
           M+FKGF PDVVTYNCLID CCKTYRI+RALELF+DM R+GC+PNR+TYNSFIRYYSAVNE
Sbjct: 275 MLFKGFAPDVVTYNCLIDGCCKTYRIERALELFEDMNRRGCVPNRVTYNSFIRYYSAVNE 334

Query: 271 IDKAVEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLLELVNEGSVPREYTYK 92
           IDKAVEM+RRM++MNHG+ T+SSYTP+IHALCEA RVLEARDFLLELV+ GS+PREYTYK
Sbjct: 335 IDKAVEMLRRMQNMNHGLATSSSYTPIIHALCEADRVLEARDFLLELVDGGSIPREYTYK 394

Query: 91  LVCNALSAADEASL-PDELRSRIEDGMEKRY 2
           LVC  + +A E +L  DE  +RI+DG+++R+
Sbjct: 395 LVCETMKSAREVNLIDDEFHNRIKDGIDERF 425


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  233 bits (595), Expect = 9e-60
 Identities = 110/151 (72%), Positives = 131/151 (86%), Gaps = 1/151 (0%)
 Frame = -2

Query: 451 MVFKGFVPDVVTYNCLIDACCKTYRIDRALELFDDMIRKGCLPNRITYNSFIRYYSAVNE 272
           M+FKGF PDVVTYN LID CCKTYRI RALELF+DM ++GC PNR+TYNSFIRYYSAVNE
Sbjct: 280 MLFKGFSPDVVTYNSLIDGCCKTYRIQRALELFEDMSKRGCTPNRLTYNSFIRYYSAVNE 339

Query: 271 IDKAVEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLLELVNEGSVPREYTYK 92
           ID+A++M+R M+ MNHGI T+SSYTP+IHALCE G+V+EARDFLLEL+ EGSVPREYTY+
Sbjct: 340 IDQAIKMLRMMQKMNHGIATSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQ 399

Query: 91  LVCNALSAADEASLPDE-LRSRIEDGMEKRY 2
           LVCN L++A +ASL DE +  RI  G+E RY
Sbjct: 400 LVCNLLNSAGKASLLDENVHERIRHGIENRY 430


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/151 (64%), Positives = 122/151 (80%), Gaps = 1/151 (0%)
 Frame = -2

Query: 451 MVFKGFVPDVVTYNCLIDACCKTYRIDRALELFDDMIRKGCLPNRITYNSFIRYYSAVNE 272
           M+F+GFVPDVVTYNCLID CCKT RI RALELF+DM  KGC+PN++TYNSFIRYYS  NE
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333

Query: 271 IDKAVEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLLELVNEGSVPREYTYK 92
           I+ A+EMMR MK + HG+P +S+YTP+IHAL E  R  EARD ++E+V  G VPREYTYK
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393

Query: 91  LVCNALSAADEAS-LPDELRSRIEDGMEKRY 2
           LVC+ALS+   AS L +EL  R+ +G+++RY
Sbjct: 394 LVCDALSSEGLASTLDEELHKRMREGIQQRY 424


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  206 bits (523), Expect = 2e-51
 Identities = 98/151 (64%), Positives = 121/151 (80%), Gaps = 1/151 (0%)
 Frame = -2

Query: 451 MVFKGFVPDVVTYNCLIDACCKTYRIDRALELFDDMIRKGCLPNRITYNSFIRYYSAVNE 272
           M+F+GFVPDVVTYNCLID CCKT RI RALELF+DM  KGC+PN++TYNSFIRYYS  NE
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333

Query: 271 IDKAVEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLLELVNEGSVPREYTYK 92
           I+ A+EMMR MK M HG+P +S+YTP+IHAL E  R  EARD L+E+V  G VPREYTYK
Sbjct: 334 IEGAIEMMRTMKKMGHGVPGSSTYTPLIHALVETRRAAEARDLLVEMVEAGLVPREYTYK 393

Query: 91  LVCNALSAADEA-SLPDELRSRIEDGMEKRY 2
           LV +ALS+   A +L +EL  R+ +G+++RY
Sbjct: 394 LVWDALSSEGMAGTLDEELHKRMREGIQQRY 424