BLASTX nr result

ID: Coptis21_contig00026613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026613
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254...   113   4e-23
emb|CBI32314.3| unnamed protein product [Vitis vinifera]              113   4e-23
ref|XP_002263069.2| PREDICTED: uncharacterized protein LOC100245...   111   2e-22
emb|CBI34341.3| unnamed protein product [Vitis vinifera]              111   2e-22
ref|XP_004158930.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   107   3e-21

>ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254568 [Vitis vinifera]
          Length = 2489

 Score =  113 bits (283), Expect = 4e-23
 Identities = 55/117 (47%), Positives = 74/117 (63%)
 Frame = +3

Query: 384 DLLIFLVIQHTDPKIGFRFWRRYLVXXXXXXXXXXXXXXNVTFQIIWAVKGAQWSIEDAW 563
           DL++FL+IQ T PK GFRF RR+L+               VTF IIWAV+G +WS+EDAW
Sbjct: 54  DLIVFLLIQFTRPKTGFRFRRRHLLLWFVVIFSILVILSQVTFLIIWAVEGGKWSMEDAW 113

Query: 564 WARLFGFVCIQPYSCPSIIAFLVVQLLVASVAFIDVNWNKFGLVRLHDSFWQRLSSS 734
           W ++ GF+ +  +  PS I FLV+QLLV  VA +++  N+FG     DS W RL S+
Sbjct: 114 WVKVIGFMRVMSWRFPSAIYFLVIQLLVVFVALVEIFGNRFGPTPWRDSCWGRLFSA 170


>emb|CBI32314.3| unnamed protein product [Vitis vinifera]
          Length = 2409

 Score =  113 bits (283), Expect = 4e-23
 Identities = 55/117 (47%), Positives = 74/117 (63%)
 Frame = +3

Query: 384 DLLIFLVIQHTDPKIGFRFWRRYLVXXXXXXXXXXXXXXNVTFQIIWAVKGAQWSIEDAW 563
           DL++FL+IQ T PK GFRF RR+L+               VTF IIWAV+G +WS+EDAW
Sbjct: 54  DLIVFLLIQFTRPKTGFRFRRRHLLLWFVVIFSILVILSQVTFLIIWAVEGGKWSMEDAW 113

Query: 564 WARLFGFVCIQPYSCPSIIAFLVVQLLVASVAFIDVNWNKFGLVRLHDSFWQRLSSS 734
           W ++ GF+ +  +  PS I FLV+QLLV  VA +++  N+FG     DS W RL S+
Sbjct: 114 WVKVIGFMRVMSWRFPSAIYFLVIQLLVVFVALVEIFGNRFGPTPWRDSCWGRLFSA 170


>ref|XP_002263069.2| PREDICTED: uncharacterized protein LOC100245172 [Vitis vinifera]
          Length = 2458

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/117 (48%), Positives = 75/117 (64%)
 Frame = +3

Query: 384 DLLIFLVIQHTDPKIGFRFWRRYLVXXXXXXXXXXXXXXNVTFQIIWAVKGAQWSIEDAW 563
           DLL FL IQ + PKIGFRF RRYL+              +  F IIWAV+G QW++ DA 
Sbjct: 29  DLLAFLFIQFSAPKIGFRFQRRYLLSWCMLIFSFLAILSHAIFYIIWAVEGDQWNVADAQ 88

Query: 564 WARLFGFVCIQPYSCPSIIAFLVVQLLVASVAFIDVNWNKFGLVRLHDSFWQRLSSS 734
           WA+L G++ +Q + CPS+I FLV+QLLVASVA +++  +KFGL    +S    L SS
Sbjct: 89  WAKLMGYLRVQSWRCPSVIYFLVIQLLVASVALLEIYGSKFGLDHHRNSCLGHLFSS 145


>emb|CBI34341.3| unnamed protein product [Vitis vinifera]
          Length = 2376

 Score =  111 bits (277), Expect = 2e-22
 Identities = 57/117 (48%), Positives = 75/117 (64%)
 Frame = +3

Query: 384 DLLIFLVIQHTDPKIGFRFWRRYLVXXXXXXXXXXXXXXNVTFQIIWAVKGAQWSIEDAW 563
           DLL FL IQ + PKIGFRF RRYL+              +  F IIWAV+G QW++ DA 
Sbjct: 25  DLLAFLFIQFSAPKIGFRFQRRYLLSWCMLIFSFLAILSHAIFYIIWAVEGDQWNVADAQ 84

Query: 564 WARLFGFVCIQPYSCPSIIAFLVVQLLVASVAFIDVNWNKFGLVRLHDSFWQRLSSS 734
           WA+L G++ +Q + CPS+I FLV+QLLVASVA +++  +KFGL    +S    L SS
Sbjct: 85  WAKLMGYLRVQSWRCPSVIYFLVIQLLVASVALLEIYGSKFGLDHHRNSCLGHLFSS 141


>ref|XP_004158930.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231523 [Cucumis sativus]
          Length = 2459

 Score =  107 bits (267), Expect = 3e-21
 Identities = 54/111 (48%), Positives = 68/111 (61%)
 Frame = +3

Query: 384 DLLIFLVIQHTDPKIGFRFWRRYLVXXXXXXXXXXXXXXNVTFQIIWAVKGAQWSIEDAW 563
           DLL+FL IQ    KIGF F RR+LV               VTF +IW+++G +WSI +AW
Sbjct: 29  DLLVFLFIQFNAHKIGFIFGRRFLVLWPIIIFSSLVILAQVTFLVIWSLEGYKWSIANAW 88

Query: 564 WARLFGFVCIQPYSCPSIIAFLVVQLLVASVAFIDVNWNKFGLVRLHDSFW 716
           WA+L GF+ IQ +  PS+I FLVVQLL   VA  D+ W + GLV   DS W
Sbjct: 89  WAKLIGFMTIQSWKSPSVIYFLVVQLLAIFVATADIFWYRIGLVPRGDSCW 139


Top