BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026605
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   163   1e-38
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   161   6e-38
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   160   8e-38
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4...   159   2e-37
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   159   3e-37

>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/83 (91%), Positives = 80/83 (96%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 GKAVKIGPSASELLGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEPPSYLTGE 71
           GKAVK+ PSASELLG GR++MRKTGGRPKPVSS SPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 15  GKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 70  FPGDYGWDTAGLSADPETFSKNR 2
           FPGDYGWDTAGLSADPETF+KNR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNR 97


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/83 (87%), Positives = 80/83 (96%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 GKAVKIGPSASELLGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEPPSYLTGE 71
           G+A+K+ PS+S+LLGEGR+TMRKT GRPKPVSS SPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 70  FPGDYGWDTAGLSADPETFSKNR 2
           FPGDYGWDTAGLSADPETF+KNR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNR 97


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/83 (89%), Positives = 80/83 (96%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 GKAVKIGPSASELLGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEPPSYLTGE 71
           G+AVK+ P+AS+LLGEGRITMRKT G+PKPVSS SPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74

Query: 70  FPGDYGWDTAGLSADPETFSKNR 2
           FPGDYGWDTAGLSADPETF+KNR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNR 97


>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
           vinifera] gi|147833686|emb|CAN73057.1| hypothetical
           protein VITISV_007597 [Vitis vinifera]
          Length = 267

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/83 (89%), Positives = 79/83 (95%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 GKAVKIGPSASELLGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEPPSYLTGE 71
           GKA+K+ PSAS+LLGEGR+TMRKTGGR KPVSS SPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15  GKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGE 74

Query: 70  FPGDYGWDTAGLSADPETFSKNR 2
           FPGDYGWDTAGLSADPETF+KNR
Sbjct: 75  FPGDYGWDTAGLSADPETFAKNR 97


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/83 (87%), Positives = 79/83 (95%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 GKAVKIGPSASELLGEGRITMRKTGGRPKPVSS-SPWYGPDRVKYLGPFSGEPPSYLTGE 71
           GKA+K+GP+ASE+LGEGR+TMRKT G+PK VSS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 15  GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 70  FPGDYGWDTAGLSADPETFSKNR 2
           FPGDYGWDTAGLSADPETFSKNR
Sbjct: 75  FPGDYGWDTAGLSADPETFSKNR 97