BLASTX nr result
ID: Coptis21_contig00026595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026595 (519 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus commun... 67 2e-09 ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED... 61 1e-07 emb|CBI33618.3| unnamed protein product [Vitis vinifera] 61 1e-07 ref|XP_003524567.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED... 60 2e-07 ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 >ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus communis] gi|223532539|gb|EEF34328.1| Myosin heavy chain, putative [Ricinus communis] Length = 650 Score = 66.6 bits (161), Expect = 2e-09 Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 5/78 (6%) Frame = +2 Query: 32 IGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIKVAKDM 196 IG+VK +N Y G RK ++ E+ SS+A+ELH+A++++ +Y E K+A+ + Sbjct: 12 IGTVKAAINMYGERILEGSSSLRKSQKDLPEQSSSRAKELHLAKRNMARYKESRKIAESV 71 Query: 197 RSQAESELFSANKTVKEM 250 ++QAESEL A KTVK++ Sbjct: 72 KNQAESELSKARKTVKDL 89 >ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Vitis vinifera] Length = 639 Score = 60.8 bits (146), Expect = 1e-07 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = +2 Query: 17 SSQETIGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIK 181 +S+ IGS K +N Y G RK EK SS AREL +AR+DI ++SE + Sbjct: 7 NSRRRIGSFKADINMYGERNLEGSAALRKPHLEILEKPSSIARELLLARRDIGRFSESRR 66 Query: 182 VAKDMRSQAESELFSANKTVKEM 250 A M+ +AESELF+A KTV+ + Sbjct: 67 AADSMKIEAESELFNAKKTVRTL 89 >emb|CBI33618.3| unnamed protein product [Vitis vinifera] Length = 363 Score = 60.8 bits (146), Expect = 1e-07 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Frame = +2 Query: 17 SSQETIGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIK 181 +S+ IGS K +N Y G RK EK SS AREL +AR+DI ++SE + Sbjct: 59 NSRRRIGSFKADINMYGERNLEGSAALRKPHLEILEKPSSIARELLLARRDIGRFSESRR 118 Query: 182 VAKDMRSQAESELFSANKTVKEM 250 A M+ +AESELF+A KTV+ + Sbjct: 119 AADSMKIEAESELFNAKKTVRTL 141 >ref|XP_003524567.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max] Length = 582 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 3/82 (3%) Frame = +2 Query: 14 GSSQETIGSVKQTVNFYRGKPDFRK---MKRPFSEKLSSKARELHMARKDIRQYSEDIKV 184 G + +G VK +VN Y + + +K+ FS K SSKA+ELH A KD+ +Y E +V Sbjct: 9 GHTTRGVGLVKASVNLYGNRIEDVNSPLLKKYFSTKQSSKAKELHRASKDMVRYKETKRV 68 Query: 185 AKDMRSQAESELFSANKTVKEM 250 A+ ++QAE++L +A +TVK++ Sbjct: 69 AESAKAQAEAKLSNAKQTVKDL 90 >ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|222844726|gb|EEE82273.1| predicted protein [Populus trichocarpa] Length = 642 Score = 57.4 bits (137), Expect = 1e-06 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%) Frame = +2 Query: 32 IGSVKQTVNFYRGK---PDFRKMKRP----FSEKLSSKARELHMARKDIRQYSEDIKVAK 190 IG+VK VN Y + +K P EK SS+A+ELHMA++D+ +Y E+ + A+ Sbjct: 12 IGTVKAAVNMYGERILESSSSSLKTPAQMDLPEKSSSRAKELHMAKRDLVRYKENRRAAE 71 Query: 191 DMRSQAESELFSANKTVKEM 250 + +AESEL A +TVKE+ Sbjct: 72 SAKVKAESELSEAKRTVKEL 91