BLASTX nr result

ID: Coptis21_contig00026595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026595
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus commun...    67   2e-09
ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    61   1e-07
emb|CBI33618.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_003524567.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED...    60   2e-07
ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002528078.1| Myosin heavy chain, putative [Ricinus communis]
           gi|223532539|gb|EEF34328.1| Myosin heavy chain, putative
           [Ricinus communis]
          Length = 650

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
 Frame = +2

Query: 32  IGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIKVAKDM 196
           IG+VK  +N Y      G    RK ++   E+ SS+A+ELH+A++++ +Y E  K+A+ +
Sbjct: 12  IGTVKAAINMYGERILEGSSSLRKSQKDLPEQSSSRAKELHLAKRNMARYKESRKIAESV 71

Query: 197 RSQAESELFSANKTVKEM 250
           ++QAESEL  A KTVK++
Sbjct: 72  KNQAESELSKARKTVKDL 89


>ref|XP_002281016.2| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Vitis
           vinifera]
          Length = 639

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
 Frame = +2

Query: 17  SSQETIGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIK 181
           +S+  IGS K  +N Y      G    RK      EK SS AREL +AR+DI ++SE  +
Sbjct: 7   NSRRRIGSFKADINMYGERNLEGSAALRKPHLEILEKPSSIARELLLARRDIGRFSESRR 66

Query: 182 VAKDMRSQAESELFSANKTVKEM 250
            A  M+ +AESELF+A KTV+ +
Sbjct: 67  AADSMKIEAESELFNAKKTVRTL 89


>emb|CBI33618.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
 Frame = +2

Query: 17  SSQETIGSVKQTVNFY-----RGKPDFRKMKRPFSEKLSSKARELHMARKDIRQYSEDIK 181
           +S+  IGS K  +N Y      G    RK      EK SS AREL +AR+DI ++SE  +
Sbjct: 59  NSRRRIGSFKADINMYGERNLEGSAALRKPHLEILEKPSSIARELLLARRDIGRFSESRR 118

Query: 182 VAKDMRSQAESELFSANKTVKEM 250
            A  M+ +AESELF+A KTV+ +
Sbjct: 119 AADSMKIEAESELFNAKKTVRTL 141


>ref|XP_003524567.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2-like [Glycine max]
          Length = 582

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = +2

Query: 14  GSSQETIGSVKQTVNFYRGKPDFRK---MKRPFSEKLSSKARELHMARKDIRQYSEDIKV 184
           G +   +G VK +VN Y  + +      +K+ FS K SSKA+ELH A KD+ +Y E  +V
Sbjct: 9   GHTTRGVGLVKASVNLYGNRIEDVNSPLLKKYFSTKQSSKAKELHRASKDMVRYKETKRV 68

Query: 185 AKDMRSQAESELFSANKTVKEM 250
           A+  ++QAE++L +A +TVK++
Sbjct: 69  AESAKAQAEAKLSNAKQTVKDL 90


>ref|XP_002303000.1| predicted protein [Populus trichocarpa] gi|222844726|gb|EEE82273.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
 Frame = +2

Query: 32  IGSVKQTVNFYRGK---PDFRKMKRP----FSEKLSSKARELHMARKDIRQYSEDIKVAK 190
           IG+VK  VN Y  +        +K P      EK SS+A+ELHMA++D+ +Y E+ + A+
Sbjct: 12  IGTVKAAVNMYGERILESSSSSLKTPAQMDLPEKSSSRAKELHMAKRDLVRYKENRRAAE 71

Query: 191 DMRSQAESELFSANKTVKEM 250
             + +AESEL  A +TVKE+
Sbjct: 72  SAKVKAESELSEAKRTVKEL 91


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