BLASTX nr result

ID: Coptis21_contig00026580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026580
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab...    56   3e-06
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    55   4e-06
ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287...    55   8e-06
ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|...    55   8e-06

>ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp.
           lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein
           ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata]
          Length = 2186

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = -2

Query: 340 ETYFHKCSRSCKSEQARSSFPSYLNALAFVCHPLAEIVNKASQLILAEEKFNPLSTKLMF 161
           + Y +K   SC  +  ++ +P YL+AL F+C PLA+++    + I+ E + +  S  L  
Sbjct: 427 KNYNNKTHGSCTDKNKKTCWPQYLDALQFLCQPLADLIYSVKRKIVLETEMSCASAHLTT 486

Query: 160 ILDAFQQFCD 131
           I DAF QFCD
Sbjct: 487 IHDAFLQFCD 496


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = -2

Query: 328 HKCSRSCKSEQARSSFPSYLNALAFVCHPLAEIVNKASQLILAEEKFNPLSTKLMFILDA 149
           ++ S +   +  ++    YLNAL F+C PLAE+VN     I+AE +    S KL  I +A
Sbjct: 455 YEASMAFAQKNGKAYLLLYLNALKFLCQPLAELVNLERVQIIAESEAISSSAKLCHIQNA 514

Query: 148 FQQFCDEFFICY 113
             QFCD F  C+
Sbjct: 515 LHQFCDVFLFCH 526


>ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287|gb|AEE84687.1|
           separase [Arabidopsis thaliana]
          Length = 2177

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -2

Query: 334 YFHKCSRSCKSEQARSSFPSYLNALAFVCHPLAEIVNKASQLILAEEKFNPLSTKLMFIL 155
           Y +K   SCK     + +P Y++AL F+C PLA+ +    + I+ E + +  S  L+ I 
Sbjct: 427 YNNKTHDSCKDRNKITCWPQYVDALKFLCQPLADFIYSVKRKIVLETEMSCASAHLITIH 486

Query: 154 DAFQQFCD 131
           DAF QFCD
Sbjct: 487 DAFLQFCD 494


>ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|AAW32909.1| separase
           [Arabidopsis thaliana] gi|332659286|gb|AEE84686.1|
           separase [Arabidopsis thaliana]
          Length = 2180

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = -2

Query: 334 YFHKCSRSCKSEQARSSFPSYLNALAFVCHPLAEIVNKASQLILAEEKFNPLSTKLMFIL 155
           Y +K   SCK     + +P Y++AL F+C PLA+ +    + I+ E + +  S  L+ I 
Sbjct: 427 YNNKTHDSCKDRNKITCWPQYVDALKFLCQPLADFIYSVKRKIVLETEMSCASAHLITIH 486

Query: 154 DAFQQFCD 131
           DAF QFCD
Sbjct: 487 DAFLQFCD 494


Top