BLASTX nr result

ID: Coptis21_contig00026562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026562
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   186   2e-45
emb|CBI27421.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   181   1e-43
ref|XP_002514555.1| menaquinone biosynthesis protein, putative [...   176   3e-42
ref|XP_002314908.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  186 bits (473), Expect = 2e-45
 Identities = 85/155 (54%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2    GSPGLKDVRVRRRRIAEDDTRAQSLRVHGLQLFLNTWYSGELWNGLKAHPHFKQILSSRM 181
            GSPGLK+   R+ R+ +DD+R+ +L  HGLQ+FL +WYSGELW  L+ HP F QI++SR+
Sbjct: 1437 GSPGLKNDEARKIRMVKDDSRSHALITHGLQIFLESWYSGELWKSLRGHPQFNQIVASRL 1496

Query: 182  QHNNMDALANALSDLSIGRQLSLWEDLKKNKKPLLFLHGEKDKKFKEIHRQMLFEV---- 349
            QH ++ +LA  LSDLSIGRQ  LWEDL++   PLL + GEKD KFK I ++M +E+    
Sbjct: 1497 QHKDVRSLAKTLSDLSIGRQRPLWEDLRQCSTPLLLIVGEKDGKFKRIAQEMCYEIGHGT 1556

Query: 350  -NGDNQSKDMHEMIEVPDCGHAVHLENPLPVISAI 451
             NGD+  K+++E++EVP+CGHA HLENPLP+I A+
Sbjct: 1557 SNGDDSRKEIYEIVEVPNCGHAAHLENPLPIIRAL 1591


>emb|CBI27421.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  186 bits (473), Expect = 2e-45
 Identities = 85/155 (54%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2    GSPGLKDVRVRRRRIAEDDTRAQSLRVHGLQLFLNTWYSGELWNGLKAHPHFKQILSSRM 181
            GSPGLK+   R+ R+ +DD+R+ +L  HGLQ+FL +WYSGELW  L+ HP F QI++SR+
Sbjct: 774  GSPGLKNDEARKIRMVKDDSRSHALITHGLQIFLESWYSGELWKSLRGHPQFNQIVASRL 833

Query: 182  QHNNMDALANALSDLSIGRQLSLWEDLKKNKKPLLFLHGEKDKKFKEIHRQMLFEV---- 349
            QH ++ +LA  LSDLSIGRQ  LWEDL++   PLL + GEKD KFK I ++M +E+    
Sbjct: 834  QHKDVRSLAKTLSDLSIGRQRPLWEDLRQCSTPLLLIVGEKDGKFKRIAQEMCYEIGHGT 893

Query: 350  -NGDNQSKDMHEMIEVPDCGHAVHLENPLPVISAI 451
             NGD+  K+++E++EVP+CGHA HLENPLP+I A+
Sbjct: 894  SNGDDSRKEIYEIVEVPNCGHAAHLENPLPIIRAL 928


>ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-like [Glycine max]
          Length = 1614

 Score =  181 bits (458), Expect = 1e-43
 Identities = 85/155 (54%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2    GSPGLKDVRVRRRRIAEDDTRAQSLRVHGLQLFLNTWYSGELWNGLKAHPHFKQILSSRM 181
            GSPGLKD   R+ R A+DD+RA ++  HGL+LF+++WY+GELW  L++HPHF +I++SR+
Sbjct: 1453 GSPGLKDKLSRKIRTAKDDSRALAVIAHGLELFVSSWYAGELWKSLRSHPHFNRIIASRL 1512

Query: 182  QHNNMDALANALSDLSIGRQLSLWEDLKKNKKPLLFLHGEKDKKFKEIHRQMLFEVNGDN 361
            QH++M  LA  LS LSIGRQ S+WEDL   + PLL +HGEKD KF++I + M+  +    
Sbjct: 1513 QHDDMQNLAQMLSGLSIGRQPSMWEDLPNCRVPLLIMHGEKDTKFRKIAQAMMKALCSSL 1572

Query: 362  QSK-----DMHEMIEVPDCGHAVHLENPLPVISAI 451
            +SK     D+HE++EVP CGHA HLENPLP+I+AI
Sbjct: 1573 RSKHEKGYDIHEVVEVPSCGHAAHLENPLPLIAAI 1607


>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
            gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
            protein, putative [Ricinus communis]
          Length = 1679

 Score =  176 bits (445), Expect = 3e-42
 Identities = 84/155 (54%), Positives = 119/155 (76%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2    GSPGLKDVRVRRRRIAEDDTRAQSLRVHGLQLFLNTWYSGELWNGLKAHPHFKQILSSRM 181
            GSPGLKD   R+ R+A+D +R++ L VHGLQLFL+ WY+GELWN L++HP F++I+SSR+
Sbjct: 1505 GSPGLKDEMSRKFRLAKDVSRSRLLIVHGLQLFLDAWYAGELWNSLRSHPRFQEIVSSRL 1564

Query: 182  QHNNMDALANALSDLSIGRQLSLWEDLKKNKKPLLFLHGEKDKKFKEIHRQMLFEVNGDN 361
             H+++ +LA ALS LSIGRQ+ LWEDLK+   PLL + GEKD+KFKEI ++M  E+    
Sbjct: 1565 SHDDVYSLAEALSGLSIGRQIPLWEDLKQCNIPLLIIVGEKDEKFKEIAQKMSHEIGQSG 1624

Query: 362  QSK-----DMHEMIEVPDCGHAVHLENPLPVISAI 451
            + +     ++ +++EVP+CGHAVH+ENPL VI A+
Sbjct: 1625 EGRGGMGNNIVQIVEVPNCGHAVHIENPLSVIRAL 1659


>ref|XP_002314908.1| predicted protein [Populus trichocarpa] gi|222863948|gb|EEF01079.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/155 (55%), Positives = 113/155 (72%), Gaps = 5/155 (3%)
 Frame = +2

Query: 2   GSPGLKDVRVRRRRIAEDDTRAQSLRVHGLQLFLNTWYSGELWNGLKAHPHFKQILSSRM 181
           GSPGLKD   R+ R A+DD+RA  L  +GL+LFL++WY+GELW   K+HPHFK+I++ R+
Sbjct: 486 GSPGLKDTMARKIRQAKDDSRADFLVAYGLELFLDSWYAGELW---KSHPHFKEIVAGRL 542

Query: 182 QHNNMDALANALSDLSIGRQLSLWEDLKKNKKPLLFLHGEKDKKFKEIHRQMLFEVNGDN 361
            H ++ +LA ALS LS G QL LWEDLK+   PLL + GEKD KFK I ++M  EV  D 
Sbjct: 543 VHEDVQSLAKALSGLSTGSQLPLWEDLKRCDLPLLLIVGEKDAKFKSIAQKMFHEVVQDR 602

Query: 362 QSKDMH-----EMIEVPDCGHAVHLENPLPVISAI 451
           + +D       E++EVP+CGHAVHLENPLP+ISA+
Sbjct: 603 KGEDRRGNNICEILEVPNCGHAVHLENPLPIISAM 637


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