BLASTX nr result

ID: Coptis21_contig00026561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026561
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   338   2e-90
gb|AFK40035.1| unknown [Medicago truncatula]                          334   3e-89
ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [...   329   1e-87
ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [...   328   2e-87
ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [...   328   2e-87

>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
            gi|297739985|emb|CBI30167.3| unnamed protein product
            [Vitis vinifera]
          Length = 211

 Score =  338 bits (867), Expect = 2e-90
 Identities = 170/208 (81%), Positives = 190/208 (91%)
 Frame = -2

Query: 1010 SGHGSNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 831
            SG  S+YD SFKILLIGDS+VGKSSLL+SFIS+SV+D L+PTIGVDFKIK LTVG K+LK
Sbjct: 5    SGQSSSYDLSFKILLIGDSAVGKSSLLVSFISSSVED-LAPTIGVDFKIKQLTVGGKRLK 63

Query: 830  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDIWAREVELYSTNPDCIK 651
            LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRE+FTNLSD+WA+EVELYSTN DC+K
Sbjct: 64   LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVK 123

Query: 650  MLVGNKVDKDSERAVTREEGIALAKECGCLFLESSAKTRENVQQCFEELASKILEVPSLL 471
            MLVGNKVD++SER V+REEGIALAKE GCLF E SAKTRENV++CFEELA KI+EVPSLL
Sbjct: 124  MLVGNKVDRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLL 183

Query: 470  EEGSILMKRNILKQKQEYQAPPSGGCCT 387
            EEGS + KRNILK K E Q PP+GGCC+
Sbjct: 184  EEGSTVGKRNILKPKPENQPPPTGGCCS 211


>gb|AFK40035.1| unknown [Medicago truncatula]
          Length = 214

 Score =  334 bits (856), Expect = 3e-89
 Identities = 164/209 (78%), Positives = 188/209 (89%)
 Frame = -2

Query: 1013 GSGHGSNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKL 834
            GSG  S +D SFKILLIGDS VGKS LL++FISNS  ++LSPTIGVDFKIK+LTVG K+L
Sbjct: 6    GSGQSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRL 65

Query: 833  KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDIWAREVELYSTNPDCI 654
            KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLS++W++E+ELYSTN +C+
Sbjct: 66   KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECV 125

Query: 653  KMLVGNKVDKDSERAVTREEGIALAKECGCLFLESSAKTRENVQQCFEELASKILEVPSL 474
            KMLVGNKVDKDSERAV+REEG++LAKE GCL LE SAKTRENV++CFEELA KI+E PSL
Sbjct: 126  KMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSL 185

Query: 473  LEEGSILMKRNILKQKQEYQAPPSGGCCT 387
            LEEGS   KRN+LKQKQE Q+  +GGCC+
Sbjct: 186  LEEGSAATKRNVLKQKQEPQSSQNGGCCS 214


>ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  329 bits (843), Expect = 1e-87
 Identities = 165/208 (79%), Positives = 186/208 (89%)
 Frame = -2

Query: 1010 SGHGSNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 831
            SG  S YD SFKILLIGDS VGKSSLL+SFIS+SV+D LSPTIGVDFKIK LTVG K+LK
Sbjct: 5    SGQSSGYDLSFKILLIGDSGVGKSSLLVSFISSSVED-LSPTIGVDFKIKTLTVGGKRLK 63

Query: 830  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDIWAREVELYSTNPDCIK 651
            LTIWDTAGQERFRTL SSYYR AQGIILVYDVTRRETFTNLS++W++EVELYSTN DC+K
Sbjct: 64   LTIWDTAGQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVK 123

Query: 650  MLVGNKVDKDSERAVTREEGIALAKECGCLFLESSAKTRENVQQCFEELASKILEVPSLL 471
            +LVGNKVD+D+ERAV+REEG+ALAKE GCL LE SAKTRENV+QCFEELA KI+E PSLL
Sbjct: 124  ILVGNKVDRDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLL 183

Query: 470  EEGSILMKRNILKQKQEYQAPPSGGCCT 387
            EEGS  +KR++LK KQE QA  +GGCC+
Sbjct: 184  EEGSTAVKRSVLKPKQESQASQNGGCCS 211


>ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  328 bits (841), Expect = 2e-87
 Identities = 163/208 (78%), Positives = 188/208 (90%)
 Frame = -2

Query: 1010 SGHGSNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 831
            SG  S YD SFKILLIGDS+VGKSSLL+SFISNS +D ++PTIGVDFKIK+LTVG K+LK
Sbjct: 5    SGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAED-IAPTIGVDFKIKMLTVGGKRLK 63

Query: 830  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDIWAREVELYSTNPDCIK 651
            LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+TFTNLS +W++EVELYSTN +C+K
Sbjct: 64   LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVK 123

Query: 650  MLVGNKVDKDSERAVTREEGIALAKECGCLFLESSAKTRENVQQCFEELASKILEVPSLL 471
            MLVGNKVD+DSER V++EEG+ALA+E GCLF E SAKTRENV++CFEELA KI+EVPSLL
Sbjct: 124  MLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLL 183

Query: 470  EEGSILMKRNILKQKQEYQAPPSGGCCT 387
            EEGS  +KRNILKQ+Q+ QA   GGCC+
Sbjct: 184  EEGSTAVKRNILKQQQQPQASEFGGCCS 211


>ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium distachyon]
          Length = 212

 Score =  328 bits (840), Expect = 2e-87
 Identities = 164/211 (77%), Positives = 188/211 (89%), Gaps = 2/211 (0%)
 Frame = -2

Query: 1016 MGSGHG-SNYDYSFKILLIGDSSVGKSSLLLSFISNS-VDDNLSPTIGVDFKIKLLTVGE 843
            MG+  G S+YD SFKILLIGDS+VGKSSLL+SF+S S  D ++SPTIGVDFKIK LTVGE
Sbjct: 1    MGTSPGTSSYDCSFKILLIGDSAVGKSSLLVSFVSASPTDHDISPTIGVDFKIKFLTVGE 60

Query: 842  KKLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDIWAREVELYSTNP 663
            KKLKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+R++FTNL+D+WA+E+EL+STN 
Sbjct: 61   KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 120

Query: 662  DCIKMLVGNKVDKDSERAVTREEGIALAKECGCLFLESSAKTRENVQQCFEELASKILEV 483
            +C+KMLVGNKVDKD ER VTREEG+A A+ECGCLFLESSAKTRENV++CFEELA KILEV
Sbjct: 121  ECVKMLVGNKVDKDEERMVTREEGLAFAQECGCLFLESSAKTRENVEKCFEELALKILEV 180

Query: 482  PSLLEEGSILMKRNILKQKQEYQAPPSGGCC 390
            PSL EEGS ++KRN LKQKQE  A   GGCC
Sbjct: 181  PSLSEEGSSVVKRNSLKQKQENNAKHGGGCC 211


Top