BLASTX nr result

ID: Coptis21_contig00026560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026560
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162047.1| PREDICTED: uncharacterized protein LOC101224...    55   8e-06

>ref|XP_004162047.1| PREDICTED: uncharacterized protein LOC101224556 [Cucumis sativus]
          Length = 374

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = -1

Query: 225 DRFRTIVYEIKEMGFDSLSSMFVHAIIVMSYMSKS--EEKWAFMRKLGFSHVESLSMFKK 52
           DR   +V  +KE+G +  + +F+ A+ VMS +S S  ++K   M+ LG+S  E L+ FKK
Sbjct: 206 DRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWKKKINVMKSLGWSEKEILTAFKK 265

Query: 51  HPRSFGLSKEKMQ 13
            P+  G S+EKM+
Sbjct: 266 EPKYLGCSEEKMR 278


Top