BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026554
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    83   2e-14
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,...    79   5e-13

>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = -2

Query: 204 YYKQMRVMGLHQSNFTFTAVIKACADLSALGYGRVIHGHVLSSGLGEDLYIHAALITFYA 25
           +Y++M    + QSN+TFTAVIKACAD+SAL  GR IH HVL  G   D ++ AALI FYA
Sbjct: 104 FYRRMVADSIPQSNYTFTAVIKACADISALRIGRPIHSHVLVCGYDSDSFVQAALIAFYA 163

Query: 24  KSGDCG 7
           KSGD G
Sbjct: 164 KSGDVG 169


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = -2

Query: 204 YYKQMRVMGLHQSNFTFTAVIKACADLSALGYGRVIHGHVLSSGLGEDLYIHAALITFYA 25
           +Y +M +  +  SN+TFT+VIK+CADLSAL +GRV+HGHVL  G G D+Y+ AAL+  Y 
Sbjct: 98  FYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYG 157

Query: 24  KSGD 13
           K GD
Sbjct: 158 KCGD 161


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 204 YYKQMRVMGLHQSNFTFTAVIKACADLSALGYGRVIHGHVLSSGLGEDLYIHAALITFYA 25
           +Y++M   G  QSN+TFT+VIKACADLSAL  G+ IH HV+  G G D+Y+ AALI  YA
Sbjct: 176 FYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 235

Query: 24  KSGD 13
           K+ D
Sbjct: 236 KASD 239


>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = -2

Query: 204 YYKQMRVMGLHQSNFTFTAVIKACADLSALGYGRVIHGHVLSSGLGEDLYIHAALITFYA 25
           +Y++M   G  QSN+TFT+VIKACADLSAL  G+ IH HV+  G G D+Y+ AALI  YA
Sbjct: 112 FYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYA 171

Query: 24  KSGD 13
           K+ D
Sbjct: 172 KASD 175


>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 386

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/66 (51%), Positives = 49/66 (74%)
 Frame = -2

Query: 204 YYKQMRVMGLHQSNFTFTAVIKACADLSALGYGRVIHGHVLSSGLGEDLYIHAALITFYA 25
           +Y  M +  +  S +TFT+++K+CADLS+L  G+V+HGHVL +G G D+Y+ AAL+  YA
Sbjct: 98  FYNCMLLSDISPSAYTFTSIVKSCADLSSLKLGKVVHGHVLVNGFGLDVYVQAALVACYA 157

Query: 24  KSGDCG 7
           KSGD G
Sbjct: 158 KSGDLG 163