BLASTX nr result

ID: Coptis21_contig00026550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026550
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis...   209   2e-52
emb|CBI33503.3| unnamed protein product [Vitis vinifera]              209   2e-52
ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   207   6e-52
ref|XP_002269487.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   207   6e-52

>ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|222843431|gb|EEE80978.1|
           predicted protein [Populus trichocarpa]
          Length = 951

 Score =  211 bits (538), Expect = 4e-53
 Identities = 96/107 (89%), Positives = 102/107 (95%)
 Frame = -3

Query: 321 GEVIEPLVSKQWFVTMEPLAEKALDAVQKGQLTIMPERFEKIYNHWLSNIKDWCISRQLW 142
           GE+IEPLVSKQWFVTMEPLAEKAL AV+KG+LTIMPERFEKIYNHWLSNIKDWCISRQLW
Sbjct: 381 GEIIEPLVSKQWFVTMEPLAEKALRAVEKGELTIMPERFEKIYNHWLSNIKDWCISRQLW 440

Query: 141 WGHRIPVWYITGKDCEEDYIVARNSEEALVKAREKYGYGVEIYQDPD 1
           WGHRIPVWYI GK+CEEDYIVARN++EAL KAREKYG  VEIYQDPD
Sbjct: 441 WGHRIPVWYIVGKNCEEDYIVARNADEALEKAREKYGKNVEIYQDPD 487


>ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 958

 Score =  209 bits (531), Expect = 2e-52
 Identities = 95/107 (88%), Positives = 101/107 (94%)
 Frame = -3

Query: 321 GEVIEPLVSKQWFVTMEPLAEKALDAVQKGQLTIMPERFEKIYNHWLSNIKDWCISRQLW 142
           GEVIEPLVSKQWFVTMEPLAEKAL AVQ+G+LTIMPERFEKIYNHWLSNIKDWCISRQLW
Sbjct: 402 GEVIEPLVSKQWFVTMEPLAEKALQAVQRGELTIMPERFEKIYNHWLSNIKDWCISRQLW 461

Query: 141 WGHRIPVWYITGKDCEEDYIVARNSEEALVKAREKYGYGVEIYQDPD 1
           WGHRIPVWYI GKDCEE+YIVARN+ EAL KA+EKYG  VEIYQ+PD
Sbjct: 462 WGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPD 508


>emb|CBI33503.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  209 bits (531), Expect = 2e-52
 Identities = 95/107 (88%), Positives = 101/107 (94%)
 Frame = -3

Query: 321 GEVIEPLVSKQWFVTMEPLAEKALDAVQKGQLTIMPERFEKIYNHWLSNIKDWCISRQLW 142
           GEVIEPLVSKQWFVTMEPLAEKAL AVQ+G+LTIMPERFEKIYNHWLSNIKDWCISRQLW
Sbjct: 97  GEVIEPLVSKQWFVTMEPLAEKALQAVQRGELTIMPERFEKIYNHWLSNIKDWCISRQLW 156

Query: 141 WGHRIPVWYITGKDCEEDYIVARNSEEALVKAREKYGYGVEIYQDPD 1
           WGHRIPVWYI GKDCEE+YIVARN+ EAL KA+EKYG  VEIYQ+PD
Sbjct: 157 WGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPD 203


>ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 959

 Score =  207 bits (528), Expect = 6e-52
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = -3

Query: 321 GEVIEPLVSKQWFVTMEPLAEKALDAVQKGQLTIMPERFEKIYNHWLSNIKDWCISRQLW 142
           GEVIEPLVSKQWFVTMEPLAEKAL AV++G+LTIMPERFEKIYNHWLSNIKDWCISRQLW
Sbjct: 403 GEVIEPLVSKQWFVTMEPLAEKALQAVERGELTIMPERFEKIYNHWLSNIKDWCISRQLW 462

Query: 141 WGHRIPVWYITGKDCEEDYIVARNSEEALVKAREKYGYGVEIYQDPD 1
           WGHRIPVWYI GKDCEE+YIVARN+ EAL KA+EKYG  VEIYQ+PD
Sbjct: 463 WGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPD 509


>ref|XP_002269487.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 572

 Score =  207 bits (528), Expect = 6e-52
 Identities = 94/107 (87%), Positives = 101/107 (94%)
 Frame = -3

Query: 321 GEVIEPLVSKQWFVTMEPLAEKALDAVQKGQLTIMPERFEKIYNHWLSNIKDWCISRQLW 142
           GEVIEPLVSKQWFVTMEPLAEKAL AV++G+LTIMPERFEKIYNHWLSNIKDWCISRQLW
Sbjct: 251 GEVIEPLVSKQWFVTMEPLAEKALQAVERGELTIMPERFEKIYNHWLSNIKDWCISRQLW 310

Query: 141 WGHRIPVWYITGKDCEEDYIVARNSEEALVKAREKYGYGVEIYQDPD 1
           WGHRIPVWYI GKDCEE+YIVARN+ EAL KA+EKYG  VEIYQ+PD
Sbjct: 311 WGHRIPVWYIVGKDCEEEYIVARNANEALEKAQEKYGKDVEIYQEPD 357


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