BLASTX nr result

ID: Coptis21_contig00026547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026547
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37697.1| unknown [Lotus japonicus]                              235   2e-60
ref|XP_003531819.1| PREDICTED: GTP-dependent nucleic acid-bindin...   235   3e-60
emb|CBI21786.3| unnamed protein product [Vitis vinifera]              235   3e-60
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   235   3e-60
gb|AFK42560.1| unknown [Medicago truncatula]                          234   7e-60

>gb|AFK37697.1| unknown [Lotus japonicus]
          Length = 424

 Score =  235 bits (600), Expect = 2e-60
 Identities = 117/128 (91%), Positives = 123/128 (96%)
 Frame = -1

Query: 414 LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGL 235
           LFNAVVENGKAQAANFPFCTIEPNVGIVAVPD RL VLSDL KSQR VPASIEFVDIAGL
Sbjct: 73  LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHVLSDLSKSQRVVPASIEFVDIAGL 132

Query: 234 VKGASQGEGLGNKFLSHIRQVDSILQVVRCFEDRDIVHVSGKVDPKSDIEVINLELVFCD 55
           VKGASQGEGLGNKFLSHIR+VDSILQVVRCF+D DI+HV+GKVDPKSDI+VINLELVFCD
Sbjct: 133 VKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFCD 192

Query: 54  LDQIEKRI 31
           LDQIEKR+
Sbjct: 193 LDQIEKRL 200


>ref|XP_003531819.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD [Glycine
           max]
          Length = 420

 Score =  235 bits (599), Expect = 3e-60
 Identities = 119/128 (92%), Positives = 123/128 (96%)
 Frame = -1

Query: 414 LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGL 235
           LFNAVVENGKAQAANFPFCTIEPNVGIVAVPD RL VLSDL KSQR+VPASIEFVDIAGL
Sbjct: 69  LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLHVLSDLSKSQRAVPASIEFVDIAGL 128

Query: 234 VKGASQGEGLGNKFLSHIRQVDSILQVVRCFEDRDIVHVSGKVDPKSDIEVINLELVFCD 55
           VKGASQGEGLGNKFLSHIR+VDSILQVVRCFED DIVHV+GKVDPKSDI+VINLELVF D
Sbjct: 129 VKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSD 188

Query: 54  LDQIEKRI 31
           LDQIEKRI
Sbjct: 189 LDQIEKRI 196


>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  235 bits (599), Expect = 3e-60
 Identities = 118/128 (92%), Positives = 123/128 (96%)
 Frame = -1

Query: 414 LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGL 235
           LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRL VLSD+ KSQR VPASIEFVDIAGL
Sbjct: 18  LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVVPASIEFVDIAGL 77

Query: 234 VKGASQGEGLGNKFLSHIRQVDSILQVVRCFEDRDIVHVSGKVDPKSDIEVINLELVFCD 55
           VKGASQGEGLGNKFLSHIR+VDSILQVVRCFED DIVHV+GKVDPKSDI+VINLELVF D
Sbjct: 78  VKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSD 137

Query: 54  LDQIEKRI 31
           LDQIEKR+
Sbjct: 138 LDQIEKRM 145


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score =  235 bits (599), Expect = 3e-60
 Identities = 118/128 (92%), Positives = 123/128 (96%)
 Frame = -1

Query: 414 LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGL 235
           LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRL VLSD+ KSQR VPASIEFVDIAGL
Sbjct: 70  LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVVPASIEFVDIAGL 129

Query: 234 VKGASQGEGLGNKFLSHIRQVDSILQVVRCFEDRDIVHVSGKVDPKSDIEVINLELVFCD 55
           VKGASQGEGLGNKFLSHIR+VDSILQVVRCFED DIVHV+GKVDPKSDI+VINLELVF D
Sbjct: 130 VKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSD 189

Query: 54  LDQIEKRI 31
           LDQIEKR+
Sbjct: 190 LDQIEKRM 197


>gb|AFK42560.1| unknown [Medicago truncatula]
          Length = 417

 Score =  234 bits (596), Expect = 7e-60
 Identities = 117/128 (91%), Positives = 123/128 (96%)
 Frame = -1

Query: 414 LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGL 235
           LFNAVVENGKAQAANFPFCTIEPNVGIVAVPD RLQVLSDL KSQR VPASIEFVDIAGL
Sbjct: 65  LFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSDLSKSQRMVPASIEFVDIAGL 124

Query: 234 VKGASQGEGLGNKFLSHIRQVDSILQVVRCFEDRDIVHVSGKVDPKSDIEVINLELVFCD 55
           VKGASQGEGLGNKFLSHIR+VDSILQVVRCF+D DI+HV+GKVDPKSDI+VINLELVF D
Sbjct: 125 VKGASQGEGLGNKFLSHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTD 184

Query: 54  LDQIEKRI 31
           LDQIEKR+
Sbjct: 185 LDQIEKRL 192


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