BLASTX nr result

ID: Coptis21_contig00026546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026546
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   135   3e-30
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   135   3e-30
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...   133   1e-29
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        133   2e-29
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   131   7e-29

>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/103 (59%), Positives = 78/103 (75%)
 Frame = -1

Query: 309 LRQRLLQAIHASSVGGHSGIQGSYQRAKTYFY*PGLKKDILEFVSSCDACQRNKGEHVFP 130
           LR++LL + H S++GGHSG + +YQR K  FY PG+K  + +FV +C  CQ+NK EH  P
Sbjct: 445 LREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMP 504

Query: 129 AGLLQPLLVPTQAWQHITTDFIEGLPKSDGKDVVMVVVDRLTK 1
           AGLLQPL +P  AW HIT DF+EGLPKS+GKDV+ V+VDR TK
Sbjct: 505 AGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTK 547


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/103 (59%), Positives = 78/103 (75%)
 Frame = -1

Query: 309 LRQRLLQAIHASSVGGHSGIQGSYQRAKTYFY*PGLKKDILEFVSSCDACQRNKGEHVFP 130
           LR++LL + H S++GGHSG + +YQR K  FY PG+K  + +FV +C  CQ+NK EH  P
Sbjct: 224 LREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMP 283

Query: 129 AGLLQPLLVPTQAWQHITTDFIEGLPKSDGKDVVMVVVDRLTK 1
           AGLLQPL +P  AW HIT DF+EGLPKS+GKDV+ V+VDR TK
Sbjct: 284 AGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTK 326


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/104 (59%), Positives = 75/104 (72%)
 Frame = -1

Query: 312 NLRQRLLQAIHASSVGGHSGIQGSYQRAKTYFY*PGLKKDILEFVSSCDACQRNKGEHVF 133
           +LR +L Q+ H S++GGHSG + +YQRAK  FY PG+KKDI  +V  C  CQ+NK EH  
Sbjct: 302 DLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNL 361

Query: 132 PAGLLQPLLVPTQAWQHITTDFIEGLPKSDGKDVVMVVVDRLTK 1
             GLL PL VP  AW HI+ DFIEGLPKSD KDV+ V+VDR TK
Sbjct: 362 QPGLLHPLPVPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTK 405


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/104 (58%), Positives = 75/104 (72%)
 Frame = -1

Query: 312  NLRQRLLQAIHASSVGGHSGIQGSYQRAKTYFY*PGLKKDILEFVSSCDACQRNKGEHVF 133
            +LR +L Q+ H S++GGHSG + +YQRAK  FY PG+KKDI  +V  C  CQ+NK EH  
Sbjct: 889  DLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNL 948

Query: 132  PAGLLQPLLVPTQAWQHITTDFIEGLPKSDGKDVVMVVVDRLTK 1
              GLL PL +P  AW HI+ DFIEGLPKSD KDV+ V+VDR TK
Sbjct: 949  QPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTK 992


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/103 (60%), Positives = 72/103 (69%)
 Frame = -1

Query: 309  LRQRLLQAIHASSVGGHSGIQGSYQRAKTYFY*PGLKKDILEFVSSCDACQRNKGEHVFP 130
            +R  LL+A HAS  GGHSGI+ +Y R K  FY PGLKK +  ++  C  CQ  K EH+  
Sbjct: 1190 IRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHI 1249

Query: 129  AGLLQPLLVPTQAWQHITTDFIEGLPKSDGKDVVMVVVDRLTK 1
             GLL PL VP  AW HIT DFIEGLPKS GKDV++VVVDRLTK
Sbjct: 1250 PGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTK 1292


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