BLASTX nr result

ID: Coptis21_contig00026517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026517
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cuc...    75   4e-12
ref|NP_564767.1| coatomer subunit zeta-1 [Arabidopsis thaliana] ...    75   4e-12
ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, par...    75   6e-12
ref|XP_004134635.1| PREDICTED: coatomer subunit zeta-2-like [Cuc...    75   6e-12
emb|CBI30821.3| unnamed protein product [Vitis vinifera]               75   6e-12

>ref|XP_004147404.1| PREDICTED: coatomer subunit zeta-2-like [Cucumis sativus]
           gi|449516984|ref|XP_004165526.1| PREDICTED: coatomer
           subunit zeta-2-like [Cucumis sativus]
          Length = 119

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -2

Query: 374 KREAXXXXXXXXXXXXXIVDGGMVLETDANFIAG---SNSMDSTAPLSEQTISQALATAR 204
           K+EA             I+DGG+VLETDAN IAG   S+S+DS APLSEQTISQALATAR
Sbjct: 51  KKEALENLDLILLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAR 110

Query: 203 EHLTRSLL 180
           EHL RSLL
Sbjct: 111 EHLARSLL 118


>ref|NP_564767.1| coatomer subunit zeta-1 [Arabidopsis thaliana]
           gi|75163941|sp|Q940S5.1|COPZ1_ARATH RecName:
           Full=Coatomer subunit zeta-1; AltName: Full=Zeta-1-coat
           protein; AltName: Full=Zeta-COP 1
           gi|15450727|gb|AAK96635.1| At1g60970/T7P1_11
           [Arabidopsis thaliana] gi|22137000|gb|AAM91345.1|
           At1g60970/T7P1_11 [Arabidopsis thaliana]
           gi|332195633|gb|AEE33754.1| coatomer subunit zeta-1
           [Arabidopsis thaliana]
          Length = 177

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/68 (64%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = -2

Query: 374 KREAXXXXXXXXXXXXXIVDGGMVLETDANFIAGS---NSMDSTAPLSEQTISQALATAR 204
           KREA             I+DGG+VLETDAN IAG    NS D  APLSEQTISQALATAR
Sbjct: 109 KREALDNLDLIFLSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAR 168

Query: 203 EHLTRSLL 180
           EHLTRSL+
Sbjct: 169 EHLTRSLM 176


>ref|XP_004162619.1| PREDICTED: coatomer subunit zeta-1-like, partial [Cucumis sativus]
          Length = 227

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -2

Query: 374 KREAXXXXXXXXXXXXXIVDGGMVLETDANFIAG---SNSMDSTAPLSEQTISQALATAR 204
           K+EA             IVDGG+VLETD N IAG   + S+DS+APLSEQTISQALATAR
Sbjct: 159 KKEALENLDLILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAR 218

Query: 203 EHLTRSLL 180
           EHLTRSLL
Sbjct: 219 EHLTRSLL 226


>ref|XP_004134635.1| PREDICTED: coatomer subunit zeta-2-like [Cucumis sativus]
          Length = 177

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -2

Query: 374 KREAXXXXXXXXXXXXXIVDGGMVLETDANFIAG---SNSMDSTAPLSEQTISQALATAR 204
           K+EA             IVDGG+VLETD N IAG   + S+DS+APLSEQTISQALATAR
Sbjct: 109 KKEALENLDLILLCLDEIVDGGIVLETDGNVIAGKVATQSIDSSAPLSEQTISQALATAR 168

Query: 203 EHLTRSLL 180
           EHLTRSLL
Sbjct: 169 EHLTRSLL 176


>emb|CBI30821.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/68 (64%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
 Frame = -2

Query: 374 KREAXXXXXXXXXXXXXIVDGGMVLETDANFIAG---SNSMDSTAPLSEQTISQALATAR 204
           K+EA             I+DGG+VLETDAN IAG   S+S+DS APLSEQTISQALATAR
Sbjct: 132 KKEALENLDLILLCLDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAR 191

Query: 203 EHLTRSLL 180
           EHL RSLL
Sbjct: 192 EHLARSLL 199


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