BLASTX nr result

ID: Coptis21_contig00026511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026511
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|222842873|gb|EEE80420.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
 Frame = -3

Query: 287 IYEQVGTQDISKVRFGYQDSKKWVPIVVRTSKDQVED--RANPVQS-KDKHVTHFS-EIL 120
           IY Q+G +D+S VRF Y  S   +P++V+ +KDQ +D  RA+ V   KDK + H S E++
Sbjct: 81  IYTQIGPEDVSVVRFVYSSSNDCIPVIVK-AKDQKQDKPRASRVDDVKDKPINHNSTEVV 139

Query: 119 NK--SHAPKKLEKVVEEPRVKLDEKTKNNSF 33
            K  + AP +  K  E+PR++ D+KT+   F
Sbjct: 140 YKLPTQAPAE-TKQAEQPRLETDKKTEKKCF 169


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