BLASTX nr result
ID: Coptis21_contig00026372
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026372 (681 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22055.3| unnamed protein product [Vitis vinifera] 244 1e-62 emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera] 221 1e-55 ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem... 206 3e-51 ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2... 189 3e-46 ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm... 176 4e-42 >emb|CBI22055.3| unnamed protein product [Vitis vinifera] Length = 1507 Score = 244 bits (622), Expect = 1e-62 Identities = 123/226 (54%), Positives = 156/226 (69%) Frame = -3 Query: 679 RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500 R KFR L VDC SI TFS QD+CC DPAAE LD + +K S Sbjct: 961 RSKFRPLLVDCFSIFTFSTNQDSCCPDPAAELPLHLYLLRDIRYKLDFFSPPSKAFSARH 1020 Query: 499 LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320 L P ++V +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDI Sbjct: 1021 LGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDI 1080 Query: 319 PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140 P LV+ +SSV SVF E+L C + ML L DI ++ P+L LL AFQPI++ DS+FSG+QP Sbjct: 1081 PNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQP 1140 Query: 139 IPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2 IP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S Sbjct: 1141 IPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 1186 >emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera] Length = 1201 Score = 221 bits (563), Expect = 1e-55 Identities = 116/226 (51%), Positives = 149/226 (65%) Frame = -3 Query: 679 RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500 R KFR L VDC SI TFS + P A LD + +K S Sbjct: 839 RSKFRPLLVDCFSIFTFSTV---FAFTPYANLPLHLYLLRDIRYKLDFFSPPSKAFSARH 895 Query: 499 LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320 L P ++V +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDI Sbjct: 896 LGSPPGLSRVTLSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDI 955 Query: 319 PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140 P LV+ +SSV SVF E+L C + ML L DI ++ P+L LL AFQPI++ DS+FSG+QP Sbjct: 956 PNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQP 1015 Query: 139 IPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2 IP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S Sbjct: 1016 IPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 1061 >ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like [Vitis vinifera] Length = 1069 Score = 206 bits (524), Expect = 3e-51 Identities = 100/180 (55%), Positives = 132/180 (73%) Frame = -3 Query: 541 DCLTRQTKQNSVGCLRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQE 362 D + +K S L P ++V +F+ KI+ LFP+ KKHF+ AV +L EG+E C+E Sbjct: 681 DFFSPPSKAFSARHLGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEE 740 Query: 361 HWKFQSASAGNPDIPGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQ 182 HWK QSASAGNPDIP LV+ +SSV SVF E+L C + ML L DI ++ P+L LL AFQ Sbjct: 741 HWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQ 800 Query: 181 PIRIPDSLFSGIQPIPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2 PI++ DS+FSG+QPIP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S Sbjct: 801 PIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 860 >ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1| predicted protein [Populus trichocarpa] Length = 1476 Score = 189 bits (481), Expect = 3e-46 Identities = 97/203 (47%), Positives = 125/203 (61%) Frame = -3 Query: 679 RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500 RFKFR L V C S+L FS Q +CC DPA E LD KQ S C Sbjct: 958 RFKFRPLHVQCYSLLMFSNNQKSCCLDPAVELPLYLYLLRDLHNKLDYFMPPGKQFSATC 1017 Query: 499 LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320 L P ++ EF++ +R LFP+L++HFD A+ VL EGD C++HW SASAGNP++ Sbjct: 1018 LSAPAGFTRMTLQEFLSNVRPLFPNLRRHFDNAIFVLKEGDGTCEDHWNVHSASAGNPEV 1077 Query: 319 PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140 +V KS V+ VFKEVL SKMLNL D++M+ VL DLL AFQP + +++FSG+Q Sbjct: 1078 ASIVFSKSVVSTLVFKEVLHSFSKMLNLIDVQMHKSVLSDLLEAFQPREVSENVFSGLQH 1137 Query: 139 IPSPGNIDYMYCGTFSFLEGVLD 71 PSPG I+Y+Y G SF+E LD Sbjct: 1138 SPSPGTIEYLYLGASSFIEDALD 1160 >ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis] gi|223538184|gb|EEF39794.1| conserved hypothetical protein [Ricinus communis] Length = 1188 Score = 176 bits (446), Expect = 4e-42 Identities = 103/227 (45%), Positives = 138/227 (60%), Gaps = 1/227 (0%) Frame = -3 Query: 679 RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500 R KFR L + C S+L FS++ LD T K+ C Sbjct: 754 RSKFRPLLIQCFSLLEFSKLP------------LYLYLLGDLHNKLDYFT-PGKEMPSRC 800 Query: 499 LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEG-DEICQEHWKFQSASAGNPD 323 + +++IS+EF++K+ LFP+L++HF+CA+ VL E + C+EHWK SASAGNPD Sbjct: 801 MGPAPGFSRLISEEFLSKVGPLFPNLRRHFECALSVLKEVVKDTCEEHWKVHSASAGNPD 860 Query: 322 IPGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQ 143 I LV KSSV+ SV KE+L C K LNLPD++M VL DLL AFQ +I + + S IQ Sbjct: 861 IGNLVFSKSSVSISVSKEILCCFRKFLNLPDVQMEKAVLSDLLEAFQSSKISEVVLSSIQ 920 Query: 142 PIPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2 P P PG I+++Y G SFLE VL++A S S LASE L+TLES+V+S Sbjct: 921 PSPLPGTIEFLYLGASSFLEDVLNTASSISFTLASESLLTLESLVAS 967