BLASTX nr result

ID: Coptis21_contig00026372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026372
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22055.3| unnamed protein product [Vitis vinifera]              244   1e-62
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   221   1e-55
ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   206   3e-51
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...   176   4e-42

>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  244 bits (622), Expect = 1e-62
 Identities = 123/226 (54%), Positives = 156/226 (69%)
 Frame = -3

Query: 679  RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500
            R KFR L VDC SI TFS  QD+CC DPAAE              LD  +  +K  S   
Sbjct: 961  RSKFRPLLVDCFSIFTFSTNQDSCCPDPAAELPLHLYLLRDIRYKLDFFSPPSKAFSARH 1020

Query: 499  LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320
            L  P   ++V   +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDI
Sbjct: 1021 LGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDI 1080

Query: 319  PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140
            P LV+ +SSV  SVF E+L C + ML L DI ++ P+L  LL AFQPI++ DS+FSG+QP
Sbjct: 1081 PNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQP 1140

Query: 139  IPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2
            IP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S
Sbjct: 1141 IPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 1186


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  221 bits (563), Expect = 1e-55
 Identities = 116/226 (51%), Positives = 149/226 (65%)
 Frame = -3

Query: 679  RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500
            R KFR L VDC SI TFS +       P A               LD  +  +K  S   
Sbjct: 839  RSKFRPLLVDCFSIFTFSTV---FAFTPYANLPLHLYLLRDIRYKLDFFSPPSKAFSARH 895

Query: 499  LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320
            L  P   ++V   +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDI
Sbjct: 896  LGSPPGLSRVTLSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDI 955

Query: 319  PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140
            P LV+ +SSV  SVF E+L C + ML L DI ++ P+L  LL AFQPI++ DS+FSG+QP
Sbjct: 956  PNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQP 1015

Query: 139  IPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2
            IP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S
Sbjct: 1016 IPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 1061


>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score =  206 bits (524), Expect = 3e-51
 Identities = 100/180 (55%), Positives = 132/180 (73%)
 Frame = -3

Query: 541  DCLTRQTKQNSVGCLRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQE 362
            D  +  +K  S   L  P   ++V   +F+ KI+ LFP+ KKHF+ AV +L EG+E C+E
Sbjct: 681  DFFSPPSKAFSARHLGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKEGNENCEE 740

Query: 361  HWKFQSASAGNPDIPGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQ 182
            HWK QSASAGNPDIP LV+ +SSV  SVF E+L C + ML L DI ++ P+L  LL AFQ
Sbjct: 741  HWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILTGLLEAFQ 800

Query: 181  PIRIPDSLFSGIQPIPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2
            PI++ DS+FSG+QPIP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+TLESIV+S
Sbjct: 801  PIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLTLESIVTS 860


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  189 bits (481), Expect = 3e-46
 Identities = 97/203 (47%), Positives = 125/203 (61%)
 Frame = -3

Query: 679  RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500
            RFKFR L V C S+L FS  Q +CC DPA E              LD      KQ S  C
Sbjct: 958  RFKFRPLHVQCYSLLMFSNNQKSCCLDPAVELPLYLYLLRDLHNKLDYFMPPGKQFSATC 1017

Query: 499  LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDI 320
            L  P    ++   EF++ +R LFP+L++HFD A+ VL EGD  C++HW   SASAGNP++
Sbjct: 1018 LSAPAGFTRMTLQEFLSNVRPLFPNLRRHFDNAIFVLKEGDGTCEDHWNVHSASAGNPEV 1077

Query: 319  PGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQP 140
              +V  KS V+  VFKEVL   SKMLNL D++M+  VL DLL AFQP  + +++FSG+Q 
Sbjct: 1078 ASIVFSKSVVSTLVFKEVLHSFSKMLNLIDVQMHKSVLSDLLEAFQPREVSENVFSGLQH 1137

Query: 139  IPSPGNIDYMYCGTFSFLEGVLD 71
             PSPG I+Y+Y G  SF+E  LD
Sbjct: 1138 SPSPGTIEYLYLGASSFIEDALD 1160


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
            gi|223538184|gb|EEF39794.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1188

 Score =  176 bits (446), Expect = 4e-42
 Identities = 103/227 (45%), Positives = 138/227 (60%), Gaps = 1/227 (0%)
 Frame = -3

Query: 679  RFKFRELSVDCLSILTFSRIQDNCCSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGC 500
            R KFR L + C S+L FS++                         LD  T   K+    C
Sbjct: 754  RSKFRPLLIQCFSLLEFSKLP------------LYLYLLGDLHNKLDYFT-PGKEMPSRC 800

Query: 499  LRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEG-DEICQEHWKFQSASAGNPD 323
            +      +++IS+EF++K+  LFP+L++HF+CA+ VL E   + C+EHWK  SASAGNPD
Sbjct: 801  MGPAPGFSRLISEEFLSKVGPLFPNLRRHFECALSVLKEVVKDTCEEHWKVHSASAGNPD 860

Query: 322  IPGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQ 143
            I  LV  KSSV+ SV KE+L C  K LNLPD++M   VL DLL AFQ  +I + + S IQ
Sbjct: 861  IGNLVFSKSSVSISVSKEILCCFRKFLNLPDVQMEKAVLSDLLEAFQSSKISEVVLSSIQ 920

Query: 142  PIPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSS 2
            P P PG I+++Y G  SFLE VL++A S S  LASE L+TLES+V+S
Sbjct: 921  PSPLPGTIEFLYLGASSFLEDVLNTASSISFTLASESLLTLESLVAS 967


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