BLASTX nr result

ID: Coptis21_contig00026278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026278
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...   174   7e-42
ref|XP_003551472.1| PREDICTED: uncharacterized protein LOC100795...   174   9e-42
ref|XP_002522770.1| conserved hypothetical protein [Ricinus comm...   168   4e-40
ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209...   168   5e-40

>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/100 (78%), Positives = 91/100 (91%)
 Frame = -2

Query: 301 FIPYNQVLDTMLHELCHNKHGPHNASFYKLWDELRKECEELISKGVSGTGEGFDCAGKRL 122
           F P++Q+LDTMLHELCHN HGPHNA FYKLWDE+RKECEEL++KG++GTGEGFD  G+RL
Sbjct: 82  FFPFDQILDTMLHELCHNVHGPHNADFYKLWDEIRKECEELMAKGITGTGEGFDLPGRRL 141

Query: 121 GGVSRQVPLSSLRKTALAAAENRARVSSLLPSGPKRLGGD 2
           GG SRQ P+SSLR+TALAAAE RAR+ SL+PSGPKRLGGD
Sbjct: 142 GGFSRQPPVSSLRQTALAAAEKRARLGSLVPSGPKRLGGD 181


>ref|XP_003551472.1| PREDICTED: uncharacterized protein LOC100795976 [Glycine max]
          Length = 409

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/100 (80%), Positives = 89/100 (89%)
 Frame = -2

Query: 301 FIPYNQVLDTMLHELCHNKHGPHNASFYKLWDELRKECEELISKGVSGTGEGFDCAGKRL 122
           F P++QVLDTMLHELCHN HGPHNA+FYKLWDELRKECEEL++KG+SG GEGFD  G+RL
Sbjct: 83  FYPFDQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMAKGISGAGEGFDLPGRRL 142

Query: 121 GGVSRQVPLSSLRKTALAAAENRARVSSLLPSGPKRLGGD 2
           GG SRQ PLSSLRKTAL AAE R ++ SLLPSGPKRLGGD
Sbjct: 143 GGYSRQPPLSSLRKTALEAAEKRVQLGSLLPSGPKRLGGD 182


>ref|XP_002522770.1| conserved hypothetical protein [Ricinus communis]
           gi|223538008|gb|EEF39621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/100 (78%), Positives = 88/100 (88%)
 Frame = -2

Query: 301 FIPYNQVLDTMLHELCHNKHGPHNASFYKLWDELRKECEELISKGVSGTGEGFDCAGKRL 122
           F P++ VLDTMLHELCHN HGPHNA+FYKLWDELRKECEEL+SKG++G+ EGFD  G+RL
Sbjct: 82  FFPFDMVLDTMLHELCHNVHGPHNANFYKLWDELRKECEELLSKGITGSAEGFDMPGRRL 141

Query: 121 GGVSRQVPLSSLRKTALAAAENRARVSSLLPSGPKRLGGD 2
           GG S Q PLSSL KTALAAAE RA++ SLLPSGPKRLGGD
Sbjct: 142 GGFSCQPPLSSLPKTALAAAEKRAKLGSLLPSGPKRLGGD 181


>ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|222860422|gb|EEE97969.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/100 (79%), Positives = 88/100 (88%)
 Frame = -2

Query: 301 FIPYNQVLDTMLHELCHNKHGPHNASFYKLWDELRKECEELISKGVSGTGEGFDCAGKRL 122
           F P++QVLDTMLHELCHN HGPHNA+FYKLWDELRKECEELI KG++GTGEGFD  G+RL
Sbjct: 82  FFPFHQVLDTMLHELCHNVHGPHNANFYKLWDELRKECEELIFKGITGTGEGFDLPGRRL 141

Query: 121 GGVSRQVPLSSLRKTALAAAENRARVSSLLPSGPKRLGGD 2
           GG S Q  LSSLRKTALAAAE RA++ S+LPS PKRLGGD
Sbjct: 142 GGFSCQPALSSLRKTALAAAEKRAKLGSMLPSQPKRLGGD 181


>ref|XP_004150300.1| PREDICTED: uncharacterized protein LOC101209563, partial [Cucumis
           sativus] gi|449510535|ref|XP_004163693.1| PREDICTED:
           uncharacterized LOC101209563, partial [Cucumis sativus]
          Length = 423

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/100 (79%), Positives = 87/100 (87%)
 Frame = -2

Query: 301 FIPYNQVLDTMLHELCHNKHGPHNASFYKLWDELRKECEELISKGVSGTGEGFDCAGKRL 122
           F P+NQVLDTMLHELCHN HGPHNA+FYKLWDELRKECEELI+KGVSGT +GFD  G+RL
Sbjct: 91  FFPFNQVLDTMLHELCHNLHGPHNANFYKLWDELRKECEELIAKGVSGTAQGFDLPGRRL 150

Query: 121 GGVSRQVPLSSLRKTALAAAENRARVSSLLPSGPKRLGGD 2
           GG  RQ  LSSLRK++LAAAE R R+ SLLPSGP RLGGD
Sbjct: 151 GGNVRQPSLSSLRKSSLAAAEGRRRLGSLLPSGPNRLGGD 190


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