BLASTX nr result

ID: Coptis21_contig00026247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026247
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata] g...   118   6e-25
ref|XP_003591547.1| ABC transporter C family protein [Medicago t...   117   1e-24
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...   117   1e-24
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       116   2e-24
ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis ...   116   2e-24

>ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata]
           gi|297324310|gb|EFH54731.1| ATMRP10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1546

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/78 (69%), Positives = 67/78 (85%)
 Frame = -1

Query: 234 CFWKDFVFTAFLAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVL 55
           CFWK+  FTA LA++RLSV+Y+GPVL+Q FV F+SGKG+SP +G+YLV  LLVAK +EVL
Sbjct: 323 CFWKEIAFTAVLAIIRLSVIYVGPVLIQSFVDFTSGKGSSPSQGYYLVLILLVAKFVEVL 382

Query: 54  SSHQFNFQSQTVGMLIRS 1
           S+HQFNF SQ +GMLIRS
Sbjct: 383 STHQFNFNSQKLGMLIRS 400


>ref|XP_003591547.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480595|gb|AES61798.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1057

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/77 (68%), Positives = 66/77 (85%)
 Frame = -1

Query: 234 CFWKDFVFTAFLAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVL 55
           CFWKD +FTAFLAV+RLSVM++GPVL+Q FV F+SGKG+S YEG+YLV  L+ AK +EVL
Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGSSVYEGYYLVLILVAAKFVEVL 389

Query: 54  SSHQFNFQSQTVGMLIR 4
           ++H FNF SQ +GMLIR
Sbjct: 390 TTHHFNFNSQKLGMLIR 406


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480594|gb|AES61797.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1515

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/77 (68%), Positives = 66/77 (85%)
 Frame = -1

Query: 234 CFWKDFVFTAFLAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVL 55
           CFWKD +FTAFLAV+RLSVM++GPVL+Q FV F+SGKG+S YEG+YLV  L+ AK +EVL
Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGSSVYEGYYLVLILVAAKFVEVL 389

Query: 54  SSHQFNFQSQTVGMLIR 4
           ++H FNF SQ +GMLIR
Sbjct: 390 TTHHFNFNSQKLGMLIR 406


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/78 (67%), Positives = 67/78 (85%)
 Frame = -1

Query: 234 CFWKDFVFTAFLAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVL 55
           CFWK+ +FTA LA+VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LLVAK +EVL
Sbjct: 321 CFWKEILFTAILAIVRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVL 380

Query: 54  SSHQFNFQSQTVGMLIRS 1
           ++HQFNF SQ +GMLIRS
Sbjct: 381 TTHQFNFDSQKLGMLIRS 398


>ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis thaliana]
           gi|90103510|sp|Q7DM58.2|AB4C_ARATH RecName: Full=ABC
           transporter C family member 4; Short=ABC transporter
           ABCC.4; Short=AtABCC4; AltName: Full=ATP-energized
           glutathione S-conjugate pump 4; AltName:
           Full=Glutathione S-conjugate-transporting ATPase 4;
           AltName: Full=Multidrug resistance-associated protein 4
           gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
           thaliana] gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis
           thaliana] gi|3738292|gb|AAC63634.1|
           glutathione-conjugate transporter AtMRP4 [Arabidopsis
           thaliana] gi|330255795|gb|AEC10889.1| ABC transporter C
           family member 4 [Arabidopsis thaliana]
          Length = 1516

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/78 (67%), Positives = 67/78 (85%)
 Frame = -1

Query: 234 CFWKDFVFTAFLAVVRLSVMYMGPVLLQGFVAFSSGKGNSPYEGFYLVAALLVAKIIEVL 55
           CFWK+ +FTA LA+VRL VMY+GPVL+Q FV F+SGK +SP++G+YLV  LLVAK +EVL
Sbjct: 321 CFWKEILFTAILAIVRLGVMYVGPVLIQSFVDFTSGKRSSPWQGYYLVLILLVAKFVEVL 380

Query: 54  SSHQFNFQSQTVGMLIRS 1
           ++HQFNF SQ +GMLIRS
Sbjct: 381 TTHQFNFDSQKLGMLIRS 398


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