BLASTX nr result

ID: Coptis21_contig00026091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026091
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323196.1| argonaute protein group [Populus trichocarpa...   110   2e-22
ref|XP_002308843.1| argonaute protein group [Populus trichocarpa...   110   2e-22
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                           107   8e-22
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   107   1e-21
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                105   4e-21

>ref|XP_002323196.1| argonaute protein group [Populus trichocarpa]
           gi|222867826|gb|EEF04957.1| argonaute protein group
           [Populus trichocarpa]
          Length = 921

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = -3

Query: 227 GSPSETDRKRTKRSFQEKIFNVEITFAAKIPMKPIALALKGIETENTGDALRVLDIILRQ 48
           GSP+ETD+KR +R+FQ K F VE++FAAKIPM+ IA AL+G E+EN+ +ALRVLDIILRQ
Sbjct: 167 GSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQEALRVLDIILRQ 226

Query: 47  QAAKRGCLLVRQSFF 3
            AAK+GCLLVRQSFF
Sbjct: 227 HAAKQGCLLVRQSFF 241


>ref|XP_002308843.1| argonaute protein group [Populus trichocarpa]
           gi|222854819|gb|EEE92366.1| argonaute protein group
           [Populus trichocarpa]
          Length = 930

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = -3

Query: 227 GSPSETDRKRTKRSFQEKIFNVEITFAAKIPMKPIALALKGIETENTGDALRVLDIILRQ 48
           GSP+ETD+KR +R+FQ K F VE++FAAKIPM+ IA AL+G E+EN+ +ALRVLDIILRQ
Sbjct: 176 GSPNETDKKRMRRAFQSKTFKVEMSFAAKIPMQAIAAALRGQESENSQEALRVLDIILRQ 235

Query: 47  QAAKRGCLLVRQSFF 3
            AAK+GCLLVRQSFF
Sbjct: 236 HAAKQGCLLVRQSFF 250


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/75 (72%), Positives = 64/75 (85%)
 Frame = -3

Query: 227 GSPSETDRKRTKRSFQEKIFNVEITFAAKIPMKPIALALKGIETENTGDALRVLDIILRQ 48
           GSP+E DRKR +R +Q K F VEI+FAAKIPM+ IA AL+G E+EN+ +ALRVLDIILRQ
Sbjct: 157 GSPNEADRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQ 216

Query: 47  QAAKRGCLLVRQSFF 3
            AAK+GCLLVRQSFF
Sbjct: 217 HAAKQGCLLVRQSFF 231


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = -3

Query: 227 GSPSETDRKRTKRSFQEKIFNVEITFAAKIPMKPIALALKGIETENTGDALRVLDIILRQ 48
           GSP+E+DRKR +R +Q K F VEI+FAAKIPM+ IA AL+G E+EN+ +ALRVLDIILRQ
Sbjct: 159 GSPNESDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQ 218

Query: 47  QAAKRGCLLVRQSFF 3
            A+K+GCLLVRQSFF
Sbjct: 219 HASKQGCLLVRQSFF 233


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/73 (72%), Positives = 63/73 (86%)
 Frame = -3

Query: 221 PSETDRKRTKRSFQEKIFNVEITFAAKIPMKPIALALKGIETENTGDALRVLDIILRQQA 42
           P+E+DRKR +R +Q K F VEI+FAAKIPM+ IA AL+G ETEN+ +ALRVLDIILRQ A
Sbjct: 159 PNESDRKRLRRPYQSKSFKVEISFAAKIPMQAIANALRGQETENSQEALRVLDIILRQHA 218

Query: 41  AKRGCLLVRQSFF 3
           AK+GCLLVRQSFF
Sbjct: 219 AKQGCLLVRQSFF 231


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