BLASTX nr result

ID: Coptis21_contig00026065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026065
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1...    82   5e-14
ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ...    82   5e-14
ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arab...    77   1e-12
dbj|BAF00656.1| hypothetical protein [Arabidopsis thaliana]            77   2e-12
ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] ...    77   2e-12

>ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1|
           unknown [Populus trichocarpa]
           gi|222837597|gb|EEE75962.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -1

Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFY 174
           MYVMVVG Y +R GE P +IKVHKMVDLS FPDREAMW+LEV+EAYKLFY
Sbjct: 78  MYVMVVGGYFVRHGETP-MIKVHKMVDLSAFPDREAMWYLEVMEAYKLFY 126


>ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis
           vinifera] gi|297734866|emb|CBI17100.3| unnamed protein
           product [Vitis vinifera]
          Length = 134

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = -1

Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFY 174
           MYVMVVG Y +RSGE PP+IKVHK+VDLS FPDRE+MW+LEVIEA++LFY
Sbjct: 80  MYVMVVGGYFVRSGE-PPMIKVHKIVDLSPFPDRESMWYLEVIEAFRLFY 128


>ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp.
           lyrata] gi|297335532|gb|EFH65949.1| hypothetical protein
           ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/51 (68%), Positives = 46/51 (90%)
 Frame = -1

Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171
           MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+
Sbjct: 80  MYVMVVGVYHIRTGDIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 129


>dbj|BAF00656.1| hypothetical protein [Arabidopsis thaliana]
          Length = 114

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/51 (68%), Positives = 46/51 (90%)
 Frame = -1

Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171
           MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+
Sbjct: 58  MYVMVVGVYQVRTGQIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 107


>ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20258784|gb|AAM13914.1| unknown protein [Arabidopsis
           thaliana] gi|332190163|gb|AEE28284.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 137

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/51 (68%), Positives = 46/51 (90%)
 Frame = -1

Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171
           MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+
Sbjct: 81  MYVMVVGVYQVRTGQIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 130


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