BLASTX nr result
ID: Coptis21_contig00026065
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00026065 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1... 82 5e-14 ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ... 82 5e-14 ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arab... 77 1e-12 dbj|BAF00656.1| hypothetical protein [Arabidopsis thaliana] 77 2e-12 ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] ... 77 2e-12 >ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1| unknown [Populus trichocarpa] gi|222837597|gb|EEE75962.1| predicted protein [Populus trichocarpa] Length = 134 Score = 82.0 bits (201), Expect = 5e-14 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = -1 Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFY 174 MYVMVVG Y +R GE P +IKVHKMVDLS FPDREAMW+LEV+EAYKLFY Sbjct: 78 MYVMVVGGYFVRHGETP-MIKVHKMVDLSAFPDREAMWYLEVMEAYKLFY 126 >ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis vinifera] gi|297734866|emb|CBI17100.3| unnamed protein product [Vitis vinifera] Length = 134 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/50 (78%), Positives = 46/50 (92%) Frame = -1 Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFY 174 MYVMVVG Y +RSGE PP+IKVHK+VDLS FPDRE+MW+LEVIEA++LFY Sbjct: 80 MYVMVVGGYFVRSGE-PPMIKVHKIVDLSPFPDRESMWYLEVIEAFRLFY 128 >ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata] gi|297335532|gb|EFH65949.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata] Length = 136 Score = 77.0 bits (188), Expect = 1e-12 Identities = 35/51 (68%), Positives = 46/51 (90%) Frame = -1 Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171 MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+ Sbjct: 80 MYVMVVGVYHIRTGDIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 129 >dbj|BAF00656.1| hypothetical protein [Arabidopsis thaliana] Length = 114 Score = 76.6 bits (187), Expect = 2e-12 Identities = 35/51 (68%), Positives = 46/51 (90%) Frame = -1 Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171 MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+ Sbjct: 58 MYVMVVGVYQVRTGQIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 107 >ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] gi|20258784|gb|AAM13914.1| unknown protein [Arabidopsis thaliana] gi|332190163|gb|AEE28284.1| uncharacterized protein [Arabidopsis thaliana] Length = 137 Score = 76.6 bits (187), Expect = 2e-12 Identities = 35/51 (68%), Positives = 46/51 (90%) Frame = -1 Query: 323 MYVMVVGAYGLRSGEEPPVIKVHKMVDLSLFPDREAMWHLEVIEAYKLFYD 171 MYVMVVG Y +R+G+ P ++KVHKMVDLS+ PDREAMW+LEV++AY+LFY+ Sbjct: 81 MYVMVVGVYQVRTGQIP-LLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYE 130