BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025981
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    82   6e-14
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    81   8e-14
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    79   4e-13
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...    70   3e-10
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    70   3e-10

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
 Frame = +2

Query: 5   ASGVLVSGCLHWLGIVNSTNKPS--IIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDL 178
           ASG LV+G LHW+      NKP+  ++  +L +E+  ++       C G    ++ LV L
Sbjct: 232 ASGALVNGRLHWISRP-CRNKPARRLVSFDLTDEQFREVSKPD---CGGLNRCNYHLVVL 287

Query: 179 AGRLXXXXXXXXXXXNVWVVKEYGIWESWIKHCNISXXXXXXXXXXXXKRFR-------- 334
            G L            +WV+KEY + ESW+K  NI             ++ +        
Sbjct: 288 RGCLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNG 347

Query: 335 ----PLMIQENGEILVEINNGALVSYNQKRKSYREIIINGLPGSFKSVPHVGTL 484
                L + +NGEIL+E  N  LVSY+ K   +++I + G P  F++V HVG+L
Sbjct: 348 RVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSL 401


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
 Frame = +2

Query: 5   ASGVLVSGCLHWLGIVNSTNKPS--IIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDL 178
           AS  LV+G LHW+      NKP+  ++  +L +E+  ++ P P    L + D H  L  L
Sbjct: 231 ASETLVNGRLHWVSRP-CRNKPARRLVSFDLTDEQFREV-PKPDCGGLNRCDYH--LAVL 286

Query: 179 AGRLXXXXXXXXXXXNVWVVKEYGIWESWIKHCNISXXXXXXXXXXXXKRF--------- 331
            G L            +WV+KEY + ESW+K  NI             +           
Sbjct: 287 RGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNG 346

Query: 332 ---RPLMIQENGEILVEINNGALVSYNQKRKSYREIIINGLPGSFKSVPHVGTL 484
              R L + +NGEIL+E  N ALVSY+ K+  +++I + G P  F++V HVG+L
Sbjct: 347 RAVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSL 400


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
 Frame = +2

Query: 8   SGVLVSGCLHWLGIVNSTNKPSIIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLAGR 187
           S  LV+G LHW+          I+  +LA+E+  +I   P   C G    ++ L+ L G 
Sbjct: 233 SEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREI---PKPDCGGLSRCNYHLLVLGGC 289

Query: 188 LXXXXXXXXXXXNVWVVKEYGIWESWIKHCNI------------SXXXXXXXXXXXXKRF 331
           L            VWV+KEY + ESWIK  NI            +            +  
Sbjct: 290 LSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGV 349

Query: 332 RPLMIQENGEILVEINNGALVSYNQKRKSYREIIINGLPGSFKSVPHVGTL 484
           R L + +NGEIL+E     LVSYN +R  ++++ + GLP  F++  HVG+L
Sbjct: 350 RLLCLLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSL 400


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328394|gb|EFH58813.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 13/173 (7%)
 Frame = +2

Query: 5   ASGVLVSGCLHWLGIVNS-TNKPSIIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLA 181
           +S  LV+G LH++            +  +L +E+  +I   P   C G    + RLV+L 
Sbjct: 236 SSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEI---PKPDCGGLNRTNHRLVNLK 292

Query: 182 GRLXXXXXXXXXXXNVWVVKEYGIWESWIKHC------------NISXXXXXXXXXXXXK 325
           G L           ++WV++ YG+ ESW K              N+             K
Sbjct: 293 GCLCAVVYGNYGKLDIWVMETYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGK 352

Query: 326 RFRPLMIQENGEILVEINNGALVSYNQKRKSYREIIINGLPGSFKSVPHVGTL 484
             R L + ENGEIL+E  +  LV+Y+ K   +++++ +GLP  F +V HVGTL
Sbjct: 353 VVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHVGTL 405


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
 Frame = +2

Query: 5   ASGVLVSGCLHWLGIVNS-TNKPSIIIVNLAEEKLSDILPVPIERCLGKIDQHFRLVDLA 181
           +S  LV+G LH++            +  +L +E+  +I   P   C G    + RLV+L 
Sbjct: 238 SSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEI---PKPDCGGLNRTNHRLVNLK 294

Query: 182 GRLXXXXXXXXXXXNVWVVKEYGIWESWIKHC------------NISXXXXXXXXXXXXK 325
           G L           ++WV+K YG+ ESW K              N+             K
Sbjct: 295 GCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGK 354

Query: 326 RFRPLMIQENGEILVEINNGALVSYNQKRKSYREIIINGLPGSFKSVPHVGTL 484
             R L + ENGEIL+E  +  LV+Y+ K   +++++ +GLP  F +V H GTL
Sbjct: 355 VVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTL 407