BLASTX nr result

ID: Coptis21_contig00025974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025974
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    60   3e-07
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 38/133 (28%), Positives = 64/133 (48%)
 Frame = +2

Query: 68  KWLPPLLSTLKLNCD*SMSDEGLGYGGMGRNEYDQVLFAYTGGGTVRSVVYQDLKGIEKG 247
           +W  P     KLN D S+    + +GG+ R+   + + A+        V   +L  I +G
Sbjct: 307 EWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWRG 366

Query: 248 LEECLVRGYDRVIVASDSMSAVLIIKEKEVPPWNCLNLVAIIKRYILRLNEFSICHVYME 427
           L   L  G   + V SDSMS V  +  K++ P   +  +  I + + + +++ I H + E
Sbjct: 367 LVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWRE 425

Query: 428 VNRAPYHLAKLSI 466
            NRA  HLAK+ +
Sbjct: 426 TNRAADHLAKMDL 438


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
 Frame = +2

Query: 71  WLPPLLSTLKLNCD*SMSDEGLGYGGMGRNEYDQVLFAYTGGGTVRSVVYQDLKGIEKGL 250
           W  P +  +KLN D S+  +  G+GG+ R+     + A+     +  +   +L  I +GL
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGL 333

Query: 251 EECLVRGYDRVIVASDSMSAVLIIKEKEVPPW---NCLNLV-AIIKRYILRLNEFSICHV 418
              L  G   + V SDSMSAV  I   +        CLN + A++K++     E+ + H 
Sbjct: 334 VLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKF----EEYKVSHA 389

Query: 419 YMEVNRAPYHLAKL 460
           + E N+A  +L+K+
Sbjct: 390 WRETNKAADYLSKM 403


>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
 Frame = +2

Query: 35  LRYAKRRQVQ*KWLPPLLSTLKLNCD*SMSDEG--LGYGGMGRNEYDQVLFAYTG--GGT 202
           +R   RR +   W  P +   KLN D S          GG+ RN   + L  Y    GGT
Sbjct: 23  IRNLHRRPIPVSWKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGT 82

Query: 203 VRSVVYQDLKGIEKGLEECLVRGYDRVIVASDSMSAV-LIIKEKEVPPWNCLNLVAIIKR 379
             ++   +L  + +GLE  L  G+  V +  DS S V +I+K K+V        V+ I  
Sbjct: 83  TSTIA--ELAALRRGLELVLENGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHINL 140

Query: 380 YILRLNEFSICHVYMEVNRAPYHLAKL 460
            +  L    + HV+ E NRA   LA++
Sbjct: 141 IMPELQNCVVTHVFREGNRAADKLARI 167


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