BLASTX nr result

ID: Coptis21_contig00025947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025947
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509725.1| map3k delta-1 protein kinase, putative [Rici...    94   9e-18
emb|CBI34722.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002276689.1| PREDICTED: uncharacterized protein LOC100244...    87   1e-15
emb|CAN62358.1| hypothetical protein VITISV_001269 [Vitis vinifera]    87   2e-15
ref|XP_003611138.1| Tyrosine-protein kinase Lyn [Medicago trunca...    73   3e-11

>ref|XP_002509725.1| map3k delta-1 protein kinase, putative [Ricinus communis]
           gi|223549624|gb|EEF51112.1| map3k delta-1 protein
           kinase, putative [Ricinus communis]
          Length = 730

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/123 (44%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
 Frame = +3

Query: 33  NES--NLYRVLLTRSRDLELSHANLTEQLAVLXXXXXXXXXXXXXXXXXYSDYARFP--- 197
           NES  +LYRV+  R   LE SHA L E+L+ L                   D        
Sbjct: 6   NESGASLYRVVADRCISLEASHAKLKEELSELVDENNRKRIIKKNDEVVMQDSDEVTSDS 65

Query: 198 ------GVYSVTSPYNKVLQSMGHAVHVCRAFDGKIIYWNRSAENLYGWKEYEALGQRAT 359
                 G ++  SPY +VL+S+GHAVHVC A  G+IIYWNRSAE+LYGWKE E LGQ   
Sbjct: 66  GMGCVSGFFAAGSPYKRVLESIGHAVHVCNAASGEIIYWNRSAEHLYGWKESEVLGQSVA 125

Query: 360 DLI 368
            LI
Sbjct: 126 GLI 128


>emb|CBI34722.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/111 (41%), Positives = 60/111 (54%)
 Frame = +3

Query: 42  NLYRVLLTRSRDLELSHANLTEQLAVLXXXXXXXXXXXXXXXXXYSDYARFPGVYSVTSP 221
           ++YR L+ R R LE S AN+  QL VL                  S +   PG +S   P
Sbjct: 5   DVYRALMDRFRSLEQSQANMRAQLEVLMEERSKEEKDGGTLWPD-SGWGHVPGYFSGGGP 63

Query: 222 YNKVLQSMGHAVHVCRAFDGKIIYWNRSAENLYGWKEYEALGQRATDLITD 374
              VL SMGH+V+    + G+I +WNRSAE LYGWK+ E LGQR  D++ D
Sbjct: 64  CRSVLDSMGHSVYAFTPWSGEIFFWNRSAEKLYGWKDCEVLGQRVVDVLID 114


>ref|XP_002276689.1| PREDICTED: uncharacterized protein LOC100244444 [Vitis vinifera]
          Length = 721

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/111 (41%), Positives = 60/111 (54%)
 Frame = +3

Query: 42  NLYRVLLTRSRDLELSHANLTEQLAVLXXXXXXXXXXXXXXXXXYSDYARFPGVYSVTSP 221
           ++YR L+ R R LE S AN+  QL VL                  S +   PG +S   P
Sbjct: 5   DVYRALMDRFRSLEQSQANMRAQLEVLMEERSKEEKDGGTLWPD-SGWGHVPGYFSGGGP 63

Query: 222 YNKVLQSMGHAVHVCRAFDGKIIYWNRSAENLYGWKEYEALGQRATDLITD 374
              VL SMGH+V+    + G+I +WNRSAE LYGWK+ E LGQR  D++ D
Sbjct: 64  CRSVLDSMGHSVYAFTPWSGEIFFWNRSAEKLYGWKDCEVLGQRVVDVLID 114


>emb|CAN62358.1| hypothetical protein VITISV_001269 [Vitis vinifera]
          Length = 723

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/111 (41%), Positives = 60/111 (54%)
 Frame = +3

Query: 42  NLYRVLLTRSRDLELSHANLTEQLAVLXXXXXXXXXXXXXXXXXYSDYARFPGVYSVTSP 221
           ++YR L+ R R LE S AN+  QL VL                  S +   PG +S   P
Sbjct: 5   DVYRALMDRFRSLEQSQANMRAQLEVLMEERSKEEKDGGTLWPD-SGWGHVPGYFSGGGP 63

Query: 222 YNKVLQSMGHAVHVCRAFDGKIIYWNRSAENLYGWKEYEALGQRATDLITD 374
              VL SMGH+V+    + G+I +WNRSAE LYGWK+ E LGQR  D++ D
Sbjct: 64  CRSVLDSMGHSVYAFTPWSGEIFFWNRSAEKLYGWKDCEVLGQRVXDVLID 114


>ref|XP_003611138.1| Tyrosine-protein kinase Lyn [Medicago truncatula]
           gi|355512473|gb|AES94096.1| Tyrosine-protein kinase Lyn
           [Medicago truncatula]
          Length = 748

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/112 (39%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
 Frame = +3

Query: 36  ESNLYRVLLTRSRDLELSHANLTEQLA-VLXXXXXXXXXXXXXXXXXYSDYARFPGVYSV 212
           E++ Y VL  R R LE     L E+   VL                  S      G +  
Sbjct: 7   ENSAYEVLADRCRRLEEQQTKLREEFKEVLQEKKKKKKPKVKDNENEDSTAGYLSGFFFS 66

Query: 213 TSPYNKVLQSMGHAVHVCRAFDGKIIYWNRSAENLYGWKEYEALGQRATDLI 368
            SPY  VL+ MGHAV+V     G+IIYWN SAE LYGWK  E +GQR  D +
Sbjct: 67  LSPYANVLKCMGHAVYVHDVTTGQIIYWNNSAETLYGWKANEIIGQRLADYL 118


Top