BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025937
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   116   2e-24
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   116   2e-24
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   114   6e-24
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   112   2e-23
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   111   5e-23

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/100 (62%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +2

Query: 5    KVAAVAGEHQVLVFVHSNAETVRTACDIRDTVRANNKLGCFLK--AASTSLLHSHAKSVK 178
            KV AVAG+HQVL+FVHS  ET +TA  IRDT  AN+ LG FLK  +AS  +LHSH + VK
Sbjct: 742  KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVK 801

Query: 179  TDGLGDLLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLV 298
             + L DLL +GFA HH GMA  D Q+V +LFA+GHVQVLV
Sbjct: 802  NNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLV 841


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/100 (62%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +2

Query: 5    KVAAVAGEHQVLVFVHSNAETVRTACDIRDTVRANNKLGCFLK--AASTSLLHSHAKSVK 178
            KV AVAG+HQVL+FVHS  ET +TA  IRDT  AN+ LG FLK  +AS  +LHSH + VK
Sbjct: 709  KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVK 768

Query: 179  TDGLGDLLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLV 298
             + L DLL +GFA HH GMA  D Q+V +LFA+GHVQVLV
Sbjct: 769  NNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLV 808


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
 Frame = +2

Query: 5    KVAAVAGEHQVLVFVHSNAETVRTACDIRDTVRANNKLGCFLK--AASTSLLHSHAKSVK 178
            KV AVAG+HQVL+FVHS  ET +TA  IRDT  AN+ LG FLK  +AS  +LH+H   VK
Sbjct: 747  KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHTHTDLVK 806

Query: 179  TDGLGDLLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLV 298
            ++ L DLL +GFA HH GM   D Q+V DLFA+GHVQVLV
Sbjct: 807  SNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLV 846


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = +2

Query: 5    KVAAVAGEHQVLVFVHSNAETVRTACDIRDTVRANNKLGCFLK--AASTSLLHSHAKSVK 178
            KV AVAG+HQVL+FVHS  ET +TA  IRD   AN+ LG FLK  +AS  +LH+H   VK
Sbjct: 747  KVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREILHTHTDLVK 806

Query: 179  TDGLGDLLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLV 298
            ++ L DLL +GFA HH GM   D Q+V DLFA+GHVQVLV
Sbjct: 807  SNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLV 846


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = +2

Query: 5   KVAAVAGEHQVLVFVHSNAETVRTACDIRDTVRANNKLGCFLK--AASTSLLHSHAKSVK 178
           KV AVAG+HQVL+FVHS  ET +TA  IRD+  AN+ LG FLK  +AS  +L SH   VK
Sbjct: 375 KVMAVAGKHQVLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVK 434

Query: 179 TDGLGDLLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLV 298
           ++ L DLL +GFA HH GM   D Q+V DLFA+GHVQVLV
Sbjct: 435 SNDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLV 474