BLASTX nr result

ID: Coptis21_contig00025932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025932
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|2...   154   8e-36
ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein...   153   2e-35
ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein...   153   2e-35
ref|XP_002520669.1| protein binding protein, putative [Ricinus c...   151   9e-35
ref|XP_002320640.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002320358.1| predicted protein [Populus trichocarpa] gi|222861131|gb|EEE98673.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  154 bits (390), Expect = 8e-36
 Identities = 80/117 (68%), Positives = 90/117 (76%)
 Frame = -2

Query: 595 LFFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSM 416
           LFFG++N QFPQR          SPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSM
Sbjct: 516 LFFGALNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSM 575

Query: 415 KQDLVRSNPANKIXXXXXXXXXXLNDLFRINNVRPIGENPNSEHRFLFQKRRRHSLS 245
           KQ+LVR++PANK+          LN LFRIN ++P+G   NSE RFLFQKRRRHS+S
Sbjct: 576 KQELVRTHPANKLFKSFTKKLSKLNTLFRINGLKPLGGKANSETRFLFQKRRRHSVS 632


>ref|XP_002267273.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           2 [Vitis vinifera]
          Length = 655

 Score =  153 bits (386), Expect = 2e-35
 Identities = 81/116 (69%), Positives = 88/116 (75%)
 Frame = -2

Query: 592 FFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 413
           FFGS+N QFPQR          SPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK
Sbjct: 540 FFGSVNGQFPQRSSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 599

Query: 412 QDLVRSNPANKIXXXXXXXXXXLNDLFRINNVRPIGENPNSEHRFLFQKRRRHSLS 245
           Q+LVRS+PANKI          LN LFRI +++PIG   NSE RFLF KRRRHS+S
Sbjct: 600 QELVRSHPANKIFKSFTKKLCKLNTLFRIRDIKPIGGKANSETRFLFPKRRRHSVS 655


>ref|XP_002267241.2| PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform
           1 [Vitis vinifera] gi|296086620|emb|CBI32255.3| unnamed
           protein product [Vitis vinifera]
          Length = 631

 Score =  153 bits (386), Expect = 2e-35
 Identities = 81/116 (69%), Positives = 88/116 (75%)
 Frame = -2

Query: 592 FFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 413
           FFGS+N QFPQR          SPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK
Sbjct: 516 FFGSVNGQFPQRSSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 575

Query: 412 QDLVRSNPANKIXXXXXXXXXXLNDLFRINNVRPIGENPNSEHRFLFQKRRRHSLS 245
           Q+LVRS+PANKI          LN LFRI +++PIG   NSE RFLF KRRRHS+S
Sbjct: 576 QELVRSHPANKIFKSFTKKLCKLNTLFRIRDIKPIGGKANSETRFLFPKRRRHSVS 631


>ref|XP_002520669.1| protein binding protein, putative [Ricinus communis]
           gi|223540054|gb|EEF41631.1| protein binding protein,
           putative [Ricinus communis]
          Length = 631

 Score =  151 bits (381), Expect = 9e-35
 Identities = 81/117 (69%), Positives = 89/117 (76%), Gaps = 1/117 (0%)
 Frame = -2

Query: 592 FFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 413
           FFG+MN QFPQR          SPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK
Sbjct: 515 FFGAMNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 574

Query: 412 QDLVRSNPANKIXXXXXXXXXXLNDLFRINNVRPI-GENPNSEHRFLFQKRRRHSLS 245
           Q+LVR++PANK+          LN LFRIN ++PI G   NSE RFLFQKRRRHS+S
Sbjct: 575 QELVRTHPANKLFKSFTRKLSKLNSLFRINGLKPIGGGKANSESRFLFQKRRRHSVS 631


>ref|XP_002320640.1| predicted protein [Populus trichocarpa] gi|222861413|gb|EEE98955.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  150 bits (380), Expect = 1e-34
 Identities = 79/116 (68%), Positives = 87/116 (75%)
 Frame = -2

Query: 592 FFGSMNSQFPQRXXXXXXXXXXSPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMK 413
           FFG++N QFPQR          SPRDNYASVRRENRELKLEVARMRMR+TDLEKDHVSMK
Sbjct: 516 FFGALNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRMTDLEKDHVSMK 575

Query: 412 QDLVRSNPANKIXXXXXXXXXXLNDLFRINNVRPIGENPNSEHRFLFQKRRRHSLS 245
           Q+LVRS+PANK           LN LFRIN ++PIG   NSE R LFQKRRRHS+S
Sbjct: 576 QELVRSHPANKFFKSFTKKLSKLNALFRINGLKPIGGKANSETRLLFQKRRRHSVS 631


Top