BLASTX nr result

ID: Coptis21_contig00025926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025926
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519623.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
emb|CBI35345.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002268419.1| PREDICTED: uncharacterized protein LOC100242...    71   1e-10
ref|XP_002321345.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
emb|CBI35346.3| unnamed protein product [Vitis vinifera]               68   7e-10

>ref|XP_002519623.1| conserved hypothetical protein [Ricinus communis]
           gi|223541213|gb|EEF42768.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = -1

Query: 351 FYFSFPLFLWIFGPIPMFISCLILVSMFYFLDVTFFEVGSAVVVDD 214
           FYFSFPLFLWIFGPIPMF+ CL+LV M YFLDVT FE G AV + D
Sbjct: 185 FYFSFPLFLWIFGPIPMFLCCLVLVLMLYFLDVT-FECGWAVAISD 229


>emb|CBI35345.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 351 FYFSFPLFLWIFGPIPMFISCLILVSMFYFLDVTF 247
           FYFSFPLFLWIFGPIPMF+SCL++V M YF+DVTF
Sbjct: 184 FYFSFPLFLWIFGPIPMFLSCLVMVLMLYFVDVTF 218


>ref|XP_002268419.1| PREDICTED: uncharacterized protein LOC100242299 [Vitis vinifera]
          Length = 239

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 351 FYFSFPLFLWIFGPIPMFISCLILVSMFYFLDVTF 247
           FYFSFPLFLWIFGPIPMF+SCL++V M YF+DVTF
Sbjct: 184 FYFSFPLFLWIFGPIPMFLSCLVMVLMLYFVDVTF 218


>ref|XP_002321345.1| predicted protein [Populus trichocarpa]
           gi|224151094|ref|XP_002337058.1| predicted protein
           [Populus trichocarpa] gi|222837933|gb|EEE76298.1|
           predicted protein [Populus trichocarpa]
           gi|222868341|gb|EEF05472.1| predicted protein [Populus
           trichocarpa]
          Length = 219

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -1

Query: 351 FYFSFPLFLWIFGPIPMFISCLILVSMFYFLDVT 250
           FYFSFPLFLWIFGPIPMF+SC+ LVSM YFLDVT
Sbjct: 185 FYFSFPLFLWIFGPIPMFLSCVFLVSMLYFLDVT 218


>emb|CBI35346.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 351 FYFSFPLFLWIFGPIPMFISCLILVSMFYFLDVT 250
           FYFS PLFLW+FGPIPMF+SCL++VSM YFLD+T
Sbjct: 184 FYFSIPLFLWLFGPIPMFLSCLLMVSMLYFLDIT 217


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