BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025923
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]        104   5e-26
gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis bellad...   103   6e-26
dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana...   103   8e-26
gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudo...   103   3e-25
gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]              101   3e-25

>emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]
          Length = 116

 Score =  104 bits (259), Expect(2) = 5e-26
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 216 MLYISGARLVPDKQVRIASTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 380
           MLYISGARLVPDKQVRIA TK+DGIGPKKAIQVCYRLGISGNIK+ ELTKYQIDQ
Sbjct: 1   MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYRLGISGNIKMNELTKYQIDQ 55



 Score = 38.5 bits (88), Expect(2) = 5e-26
 Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 MIGQDHVVHWEL-RGETSRHRRLI-LFLYRXSHQMDAL 495
           MIGQDHVVHWEL RGE +   RLI +  YR     D L
Sbjct: 59  MIGQDHVVHWELKRGERADIERLISISCYRGIRHQDGL 96


>gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna]
          Length = 116

 Score =  103 bits (258), Expect(2) = 6e-26
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 216 MLYISGARLVPDKQVRIASTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 380
           MLYISGARLVPD+QVRIA TK+DGIGPKKAIQVCYRLGISGNIKI ELTKYQIDQ
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQ 55



 Score = 38.5 bits (88), Expect(2) = 6e-26
 Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 MIGQDHVVHWEL-RGETSRHRRLI-LFLYRXSHQMDAL 495
           MIGQDHVVHWEL RGE +   RLI +  YR     D L
Sbjct: 59  MIGQDHVVHWELKRGERADIERLISISCYRGIRHQDGL 96


>dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score =  103 bits (257), Expect(2) = 8e-26
 Identities = 52/55 (94%), Positives = 53/55 (96%)
 Frame = +3

Query: 216 MLYISGARLVPDKQVRIASTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 380
           MLYISGARLV D+QVRIA TKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ
Sbjct: 1   MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 55



 Score = 38.5 bits (88), Expect(2) = 8e-26
 Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 MIGQDHVVHWEL-RGETSRHRRLI-LFLYRXSHQMDAL 495
           MIGQDHVVHWEL RGE +   RLI +  YR     D L
Sbjct: 59  MIGQDHVVHWELKRGERADIERLISISCYRGIRHQDGL 96


>gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus]
          Length = 116

 Score =  103 bits (258), Expect(2) = 3e-25
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = +3

Query: 216 MLYISGARLVPDKQVRIASTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 380
           MLYISGARLVPD+QVRIA TK+DGIGPKKAIQVCYRLGISGNIKI ELTKYQIDQ
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQ 55



 Score = 36.2 bits (82), Expect(2) = 3e-25
 Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 MIGQDHVVHWE-LRGETSRHRRLI-LFLYRXSHQMDAL 495
           MIGQDHVVHWE  RGE +   RLI +  YR     D L
Sbjct: 59  MIGQDHVVHWEWRRGERADIERLISISCYRGIRHQDGL 96


>gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]
          Length = 116

 Score =  101 bits (252), Expect(2) = 3e-25
 Identities = 51/55 (92%), Positives = 52/55 (94%)
 Frame = +3

Query: 216 MLYISGARLVPDKQVRIASTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 380
           M YISGARLV D+QVRIA TKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ
Sbjct: 1   MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ 55



 Score = 38.5 bits (88), Expect(2) = 3e-25
 Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +1

Query: 388 MIGQDHVVHWEL-RGETSRHRRLI-LFLYRXSHQMDAL 495
           MIGQDHVVHWEL RGE +   RLI +  YR     D L
Sbjct: 59  MIGQDHVVHWELKRGERADIERLISISCYRGIRHQDGL 96