BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025888
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   1e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    62   1e-07
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   2e-07
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    60   2e-07
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    60   2e-07

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
 Frame = +1

Query: 322 AWNCQGIGSASTMVALKNLILVSDPDILCLSKTKVTEKKMVLVSKKIKYSGKCIIPTAG- 498
           +WNC+G+GS S + AL+ L+   +P I+ LS+TK+   +M  V KK+K+     +   G 
Sbjct: 6   SWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEGE 65

Query: 499 ---LNGGLAIFWNDNIQLDILRATPNHI 573
                GGLA+ W   I++ ++  + NHI
Sbjct: 66  CRKRRGGLAMLWRSEIKVQVMSMSSNHI 93


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/81 (30%), Positives = 54/81 (66%)
 Frame = +1

Query: 307 AMTTTAWNCQGIGSASTMVALKNLILVSDPDILCLSKTKVTEKKMVLVSKKIKYSGKCII 486
           AM+  AWNC+G+G+ +T+  L+ LI  +   ++ L +T+ + +KM  + +K+ + G   +
Sbjct: 635 AMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGV 694

Query: 487 PTAGLNGGLAIFWNDNIQLDI 549
            + G +GGLA++W++++ +D+
Sbjct: 695 SSEGKSGGLALYWDESVSVDV 715


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
 Frame = +1

Query: 310 MTTTAWNCQGIGSASTMVALKNLILVSDPDILCLSKTKVTEKKMVLVSKKIKYSGKCIIP 489
           M    WNCQG+G+  T+  L+ L+  + PD L +S+TKVT+  +    + + +SG   + 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 490 TAGLNGGLAIFW-NDNIQLDILRATPNHIIGKLSNYLSNSD--WFF 618
             G  GGL +FW  + I   ++  + NHI G +    SN D  W F
Sbjct: 61  CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVG---SNGDVRWRF 103


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 41/78 (52%)
 Frame = +1

Query: 310 MTTTAWNCQGIGSASTMVALKNLILVSDPDILCLSKTKVTEKKMVLVSKKIKYSGKCIIP 489
           M   AWNC+G+G+  T+  L NL    DPDIL LS TK+   K+     K+      +  
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 507

Query: 490 TAGLNGGLAIFWNDNIQL 543
             G +GGLA+FW   I L
Sbjct: 508 CQGKSGGLAVFWKKEINL 525


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1301

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 41/78 (52%)
 Frame = +1

Query: 310 MTTTAWNCQGIGSASTMVALKNLILVSDPDILCLSKTKVTEKKMVLVSKKIKYSGKCIIP 489
           M   AWNC+G+G+  T+  L NL    DPDIL LS TK+   K+     K+      +  
Sbjct: 425 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 484

Query: 490 TAGLNGGLAIFWNDNIQL 543
             G +GGLA+FW   I L
Sbjct: 485 CQGKSGGLAVFWKKEINL 502