BLASTX nr result

ID: Coptis21_contig00025863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025863
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31205.3| unnamed protein product [Vitis vinifera]              375   e-102
ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   375   e-102
emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]   372   e-101
ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|22...   370   e-100
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   368   1e-99

>emb|CBI31205.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  375 bits (963), Expect = e-102
 Identities = 172/217 (79%), Positives = 202/217 (93%)
 Frame = +2

Query: 2   LSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQE 181
           LSDFGRYPP +ANV KDVIAPYKHVI++F++D S F+ RPTLLYFQGAIYRKDGG IRQE
Sbjct: 219 LSDFGRYPPNIANVGKDVIAPYKHVIKSFINDTSDFDSRPTLLYFQGAIYRKDGGFIRQE 278

Query: 182 LFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPV 361
           LFYLLKDE+++HF+FG+ QG+GI KA+QGM SSKFCLNIAGDTPSSNRLFDAIASHCVPV
Sbjct: 279 LFYLLKDEKDVHFAFGNTQGNGINKASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPV 338

Query: 362 IISDEIELPYEDVLDYSEFCIFIRTSDALKEKFIIKLIRSIGKEEWTRMWNKLKDIERFF 541
           IISDEIELPYEDVLDYS+FCIF+RTSDALK+KF+IKLIRSI K+EWTRMW +LK++E FF
Sbjct: 339 IISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLIKLIRSIKKDEWTRMWRRLKEVENFF 398

Query: 542 EFRYPSHEDDAVQMIWQAVARKVPAVKLRIHKSQRFA 652
           EF+YPS E DAVQMIWQA+ RKVPA+++++HKS+RF+
Sbjct: 399 EFQYPSKEGDAVQMIWQAITRKVPAIRMKLHKSRRFS 435


>ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis
           vinifera]
          Length = 488

 Score =  375 bits (963), Expect = e-102
 Identities = 172/217 (79%), Positives = 202/217 (93%)
 Frame = +2

Query: 2   LSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQE 181
           LSDFGRYPP +ANV KDVIAPYKHVI++F++D S F+ RPTLLYFQGAIYRKDGG IRQE
Sbjct: 252 LSDFGRYPPNIANVGKDVIAPYKHVIKSFINDTSDFDSRPTLLYFQGAIYRKDGGFIRQE 311

Query: 182 LFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPV 361
           LFYLLKDE+++HF+FG+ QG+GI KA+QGM SSKFCLNIAGDTPSSNRLFDAIASHCVPV
Sbjct: 312 LFYLLKDEKDVHFAFGNTQGNGINKASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPV 371

Query: 362 IISDEIELPYEDVLDYSEFCIFIRTSDALKEKFIIKLIRSIGKEEWTRMWNKLKDIERFF 541
           IISDEIELPYEDVLDYS+FCIF+RTSDALK+KF+IKLIRSI K+EWTRMW +LK++E FF
Sbjct: 372 IISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLIKLIRSIKKDEWTRMWRRLKEVENFF 431

Query: 542 EFRYPSHEDDAVQMIWQAVARKVPAVKLRIHKSQRFA 652
           EF+YPS E DAVQMIWQA+ RKVPA+++++HKS+RF+
Sbjct: 432 EFQYPSKEGDAVQMIWQAITRKVPAIRMKLHKSRRFS 468


>emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]
          Length = 488

 Score =  372 bits (955), Expect = e-101
 Identities = 170/217 (78%), Positives = 201/217 (92%)
 Frame = +2

Query: 2   LSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQE 181
           LSDFGRYPP +ANV KD+IAPYKHVI++F++D S F+ RPTLLYFQGAIYRKDGG IRQE
Sbjct: 252 LSDFGRYPPNIANVGKDLIAPYKHVIKSFINDTSDFDSRPTLLYFQGAIYRKDGGFIRQE 311

Query: 182 LFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPV 361
           LFYLLKDE+++HF+FG+ QG+GI KA+QGM SSKFCLNIAGDTPSSNRLFDAIASHCVPV
Sbjct: 312 LFYLLKDEKDVHFAFGNTQGNGINKASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPV 371

Query: 362 IISDEIELPYEDVLDYSEFCIFIRTSDALKEKFIIKLIRSIGKEEWTRMWNKLKDIERFF 541
           IISDEIELPYEDVLDYS+FCIF+RTSDALK+KF+ KLIRSI K+EWTRMW +LK++E FF
Sbjct: 372 IISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLXKLIRSIKKDEWTRMWRRLKEVENFF 431

Query: 542 EFRYPSHEDDAVQMIWQAVARKVPAVKLRIHKSQRFA 652
           EF+YPS E DAVQMIWQA+ RKVPA+++++HKS+RF+
Sbjct: 432 EFQYPSKEGDAVQMIWQAITRKVPAIRMKLHKSRRFS 468


>ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1|
           catalytic, putative [Ricinus communis]
          Length = 512

 Score =  370 bits (949), Expect = e-100
 Identities = 171/217 (78%), Positives = 199/217 (91%)
 Frame = +2

Query: 2   LSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQE 181
           L+DFGRYPP +ANV+KD+IAPYKHVIR++  D S F+ RPTLLYFQGAIYRKDGG  RQE
Sbjct: 264 LADFGRYPPNIANVDKDLIAPYKHVIRSYADDSSTFDSRPTLLYFQGAIYRKDGGFARQE 323

Query: 182 LFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPV 361
           LFYLLKDE+++HF FGSVQ DGI KA+QGM +SKFCLNIAGDTPSSNRLFDAIASHCVPV
Sbjct: 324 LFYLLKDEKDVHFQFGSVQKDGINKASQGMHTSKFCLNIAGDTPSSNRLFDAIASHCVPV 383

Query: 362 IISDEIELPYEDVLDYSEFCIFIRTSDALKEKFIIKLIRSIGKEEWTRMWNKLKDIERFF 541
           IISD+IELPYEDVLDYS+FCIF+RTSDA+KEKF+I LIR IGK+EWT+MW KLK++ERFF
Sbjct: 384 IISDDIELPYEDVLDYSQFCIFVRTSDAIKEKFLINLIRGIGKDEWTQMWQKLKEVERFF 443

Query: 542 EFRYPSHEDDAVQMIWQAVARKVPAVKLRIHKSQRFA 652
           EF+YPS E DAVQMIWQAVARKVPA++++I+KS RF+
Sbjct: 444 EFQYPSKEGDAVQMIWQAVARKVPAIRMKINKSMRFS 480


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 509

 Score =  368 bits (944), Expect = 1e-99
 Identities = 169/217 (77%), Positives = 201/217 (92%)
 Frame = +2

Query: 2   LSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQE 181
           LSDFGRYPP +ANVEKDVIAPYKH+I ++V+D S F+ RPTLLYFQGAIYRKDGG+ RQE
Sbjct: 273 LSDFGRYPPNIANVEKDVIAPYKHLISSYVNDNSNFDSRPTLLYFQGAIYRKDGGLARQE 332

Query: 182 LFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPV 361
           LFYLLKDE+++HFSFGS+  DGI+KAT+GM++SKFCLNIAGDTPSSNRLFDAIASHCVPV
Sbjct: 333 LFYLLKDEKDVHFSFGSIGKDGIKKATEGMRASKFCLNIAGDTPSSNRLFDAIASHCVPV 392

Query: 362 IISDEIELPYEDVLDYSEFCIFIRTSDALKEKFIIKLIRSIGKEEWTRMWNKLKDIERFF 541
           IISD+IELPYEDV+DYSEFCIF+RTSDA+KEKF+I  IR I KEEWTRMWNKLK++E FF
Sbjct: 393 IISDKIELPYEDVIDYSEFCIFVRTSDAIKEKFLINFIRGIAKEEWTRMWNKLKEVEHFF 452

Query: 542 EFRYPSHEDDAVQMIWQAVARKVPAVKLRIHKSQRFA 652
           EF +PS E+DAVQMIWQAVARKVPA++L++++ +RF+
Sbjct: 453 EFHFPSKENDAVQMIWQAVARKVPAMRLKLNRFERFS 489


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