BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025855
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...   899   0.0  
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...   894   0.0  
ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi...   892   0.0  
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...   887   0.0  
ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...   870   0.0  

>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
            [Vitis vinifera]
          Length = 875

 Score =  899 bits (2322), Expect = 0.0
 Identities = 435/531 (81%), Positives = 470/531 (88%)
 Frame = -3

Query: 1817 CSLGVYHGNQVLKRLQDHTVARGFFYWLKRQPGFKHDEHSYTTMVGILGRARQFNAINRL 1638
            C +  Y  NQVLK++QDH VA GFFYWLKRQ GFKHD H+YTTMVGILGRARQF AIN+L
Sbjct: 342  CLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKL 401

Query: 1637 LDEMVEDGSVPNVVTYNRLIHSYGRANYLDEAVNVFYQMQEEGCEPDRVTYCTLIDIHAK 1458
            L EMV DG  PNVVTYNRLIHSYGRANYL+EAV+VF +MQE GC+PDRVTYCTLIDIHAK
Sbjct: 402  LAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAK 461

Query: 1457 SGFLDVALDMYGRMQEAGLTPDTFTYSVIINCLGKAGHLDASYKLFSEMIDQGCVPNLVT 1278
            +GFLDVAL MY +MQEA L+PDTFTYSVIINCLGKAGHL +++KLF EM+DQGCVPNLVT
Sbjct: 462  AGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVT 521

Query: 1277 YNIMIALQAKARNYPCALQLYRDMQTVGFQPDKVTYSIVMEVLGHCGHLEEVEIVFTEMK 1098
            YNIMIALQAKARNYP AL+LYRDMQ  GFQPDKVTYSIVMEVLGHCGHLEE E +FTEMK
Sbjct: 522  YNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMK 581

Query: 1097 LKNWVPDEPVYGLLVDLWGKAGEVDRARGWYQEMLDAGVRPNVPTCNSLLSAFIRVHRFS 918
             KNWVPDEPVYGLLVDLWGK G V+++  WYQ ML+AG+ PNVPTCNSLLSAF+RVHR S
Sbjct: 582  RKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLS 641

Query: 917  DACNVLHSMPRLGLNPSLQTYTLLLSCCTDTQYFNDMGQCHELMAVTAHPAHAFLQSMPA 738
            DA N+L SM RLGL PSLQTYTLLLSCCT+ +   DMG C ELMAVT HPAH FL SMPA
Sbjct: 642  DAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPA 701

Query: 737  AGIDGQNVREHASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEASSVWEVAAQKNVY 558
            AG DGQNVR+H S FLDLMHSEDRESKRGLVDAV+DFLHKSGLKEEA SVWEVAAQKNVY
Sbjct: 702  AGPDGQNVRDHVSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVY 761

Query: 557  PDAVREKSSCYWLINLHVMSDGTAITALSRTLAWFRRQMLISGIGPMRIDIVTGWGRRSR 378
            PDAVREKSSCYWLINLH MSDGTA+TALSRTLAWF R+ML+SG  P RIDIVTGWGRRSR
Sbjct: 762  PDAVREKSSCYWLINLHFMSDGTAVTALSRTLAWFHREMLVSGTVPSRIDIVTGWGRRSR 821

Query: 377  VTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 225
            VTG+SLVRQ+V+ELLHIF FPFFTENGNSGCFVG GE L RWLL SYVERM
Sbjct: 822  VTGASLVRQAVQELLHIFSFPFFTENGNSGCFVGRGEPLGRWLLQSYVERM 872


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score =  894 bits (2311), Expect = 0.0
 Identities = 429/530 (80%), Positives = 475/530 (89%)
 Frame = -3

Query: 1814 SLGVYHGNQVLKRLQDHTVARGFFYWLKRQPGFKHDEHSYTTMVGILGRARQFNAINRLL 1635
            S+  Y  NQVLK+LQDHTVA  FFYWLKRQPGF HD H+YTTMVGILGRA+QF AIN+LL
Sbjct: 344  SMDPYQANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLL 403

Query: 1634 DEMVEDGSVPNVVTYNRLIHSYGRANYLDEAVNVFYQMQEEGCEPDRVTYCTLIDIHAKS 1455
            D+MV+DG  PNVVTYNRLIHSYGRANYL++AV+VF +MQ  GCEPDRVTYCTLIDIHAK+
Sbjct: 404  DQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKA 463

Query: 1454 GFLDVALDMYGRMQEAGLTPDTFTYSVIINCLGKAGHLDASYKLFSEMIDQGCVPNLVTY 1275
            GFLD AL+MY RMQ AGL+PDTFTYSVIINCLGKAGHL A++KLF EM++QGCVPNLVTY
Sbjct: 464  GFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTY 523

Query: 1274 NIMIALQAKARNYPCALQLYRDMQTVGFQPDKVTYSIVMEVLGHCGHLEEVEIVFTEMKL 1095
            NIMIALQAKARNY  AL+LYRDMQ+ GFQPDKVTYSIVMEVLGHCG+L+E E VF+EMK 
Sbjct: 524  NIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKR 583

Query: 1094 KNWVPDEPVYGLLVDLWGKAGEVDRARGWYQEMLDAGVRPNVPTCNSLLSAFIRVHRFSD 915
            KNWVPDEPVYGLLVDLWGKAG V++A  WYQ ML+ G+RPNVPTCNSLLSAF+RVH+ +D
Sbjct: 584  KNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLAD 643

Query: 914  ACNVLHSMPRLGLNPSLQTYTLLLSCCTDTQYFNDMGQCHELMAVTAHPAHAFLQSMPAA 735
            A N+L SM  LGLNPSLQTYTLLLSCCT+ +   DMG   ELMAVT HPAH FL S+P+A
Sbjct: 644  AYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSA 703

Query: 734  GIDGQNVREHASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEASSVWEVAAQKNVYP 555
            G DGQNVR+HAS FLDLMHSEDRESKRGLVDAV+DFLHKSGLKEEA SVWEVAAQ+NVYP
Sbjct: 704  GPDGQNVRDHASKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYP 763

Query: 554  DAVREKSSCYWLINLHVMSDGTAITALSRTLAWFRRQMLISGIGPMRIDIVTGWGRRSRV 375
            DAV+EK SCYWLINLHVMSDGTA+TALSRTLAWFR+QML+SGI P RIDIVTGWGRRSRV
Sbjct: 764  DAVKEKGSCYWLINLHVMSDGTAVTALSRTLAWFRQQMLVSGISPSRIDIVTGWGRRSRV 823

Query: 374  TGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 225
            TGSS+VRQ+V+ELLHIF FPFFTENGNSGCFVGCGE LNRWLL  YV+RM
Sbjct: 824  TGSSMVRQAVQELLHIFSFPFFTENGNSGCFVGCGEPLNRWLLQPYVDRM 873


>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900-like
            [Glycine max]
          Length = 882

 Score =  892 bits (2305), Expect = 0.0
 Identities = 424/530 (80%), Positives = 473/530 (89%)
 Frame = -3

Query: 1814 SLGVYHGNQVLKRLQDHTVARGFFYWLKRQPGFKHDEHSYTTMVGILGRARQFNAINRLL 1635
            S+  Y  NQ+LK+LQDH+VA  FFYWLKRQPGF HD H+YTTMVGILGRAR+F AIN+LL
Sbjct: 350  SIDAYQANQILKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLL 409

Query: 1634 DEMVEDGSVPNVVTYNRLIHSYGRANYLDEAVNVFYQMQEEGCEPDRVTYCTLIDIHAKS 1455
            ++MV+DG  PNVVTYNRLIHSYGRANYL EA+NVF QMQE GCEPDRVTYCTLIDIHAK+
Sbjct: 410  EQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKA 469

Query: 1454 GFLDVALDMYGRMQEAGLTPDTFTYSVIINCLGKAGHLDASYKLFSEMIDQGCVPNLVTY 1275
            GFLDVA+ MY RMQE GL+PDTFTYSV+INCLGK+G+L A+++LF EM+DQGCVPN+VTY
Sbjct: 470  GFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTY 529

Query: 1274 NIMIALQAKARNYPCALQLYRDMQTVGFQPDKVTYSIVMEVLGHCGHLEEVEIVFTEMKL 1095
            NI+IALQAKARNY  AL+LYRDMQ  GF+PDKVTYSIVMEVLG+CG+LEE E VF EMK 
Sbjct: 530  NILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQ 589

Query: 1094 KNWVPDEPVYGLLVDLWGKAGEVDRARGWYQEMLDAGVRPNVPTCNSLLSAFIRVHRFSD 915
             NWVPDEPVYGLL+DLWGKAG V++A  WY  ML AG+ PNVPTCNSLLSAF+RVHR  D
Sbjct: 590  NNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPD 649

Query: 914  ACNVLHSMPRLGLNPSLQTYTLLLSCCTDTQYFNDMGQCHELMAVTAHPAHAFLQSMPAA 735
            A N+L +M  LGLNPSLQTYTLLLSCCT+ Q   DMG C ELMAV+ HPAHAFLQSMPAA
Sbjct: 650  AYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAA 709

Query: 734  GIDGQNVREHASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEASSVWEVAAQKNVYP 555
            G DGQNVR+H S FLDLMHSEDRE KRGLVDAV+DFLHKSGLKEEA SVWEVAAQKNVYP
Sbjct: 710  GPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 769

Query: 554  DAVREKSSCYWLINLHVMSDGTAITALSRTLAWFRRQMLISGIGPMRIDIVTGWGRRSRV 375
            DA+REKS+CYWLINLHVMSDGTA+TALSRTLAWFRRQML SG+GP RIDI+TGWGRRSRV
Sbjct: 770  DAIREKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRIDIITGWGRRSRV 829

Query: 374  TGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 225
            TGSSLVRQ+V+ELLH+F FPFFTENGNSGCFVGCGE L++WL+HSYVERM
Sbjct: 830  TGSSLVRQAVQELLHVFSFPFFTENGNSGCFVGCGEPLSQWLVHSYVERM 879


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900-like
            [Glycine max]
          Length = 879

 Score =  887 bits (2293), Expect = 0.0
 Identities = 424/530 (80%), Positives = 472/530 (89%)
 Frame = -3

Query: 1814 SLGVYHGNQVLKRLQDHTVARGFFYWLKRQPGFKHDEHSYTTMVGILGRARQFNAINRLL 1635
            S+  Y  NQ+LK+LQDH+VA GFF WLKRQPGF HD H+YTTMVGILGRAR+F AIN+LL
Sbjct: 347  SIDAYQANQILKQLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLL 406

Query: 1634 DEMVEDGSVPNVVTYNRLIHSYGRANYLDEAVNVFYQMQEEGCEPDRVTYCTLIDIHAKS 1455
            ++MV+DG  PNVVTYNRLIHSYGRANYL EA+NVF QMQE GCEPDRVTYCTLIDIHAK+
Sbjct: 407  EQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKA 466

Query: 1454 GFLDVALDMYGRMQEAGLTPDTFTYSVIINCLGKAGHLDASYKLFSEMIDQGCVPNLVTY 1275
            GFLDVA+ MY RMQE GL+PDTFTYSV+INCLGK+G+L A+++LF EM+DQGCVPN+VTY
Sbjct: 467  GFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTY 526

Query: 1274 NIMIALQAKARNYPCALQLYRDMQTVGFQPDKVTYSIVMEVLGHCGHLEEVEIVFTEMKL 1095
            NI+IALQAKARNY  AL+LYRDMQ  GF+PDKVTYSIVMEVLGHCG+LEE E VF EM+ 
Sbjct: 527  NILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQ 586

Query: 1094 KNWVPDEPVYGLLVDLWGKAGEVDRARGWYQEMLDAGVRPNVPTCNSLLSAFIRVHRFSD 915
             +WVPDEPVYGLLVDLWGKAG V++A  WY  ML AG+ PNVPTCNSLLSAF+RVHR  D
Sbjct: 587  NHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPD 646

Query: 914  ACNVLHSMPRLGLNPSLQTYTLLLSCCTDTQYFNDMGQCHELMAVTAHPAHAFLQSMPAA 735
            A N+L +M  LGLNPSLQTYTLLLSCCT+ Q   DMG C ELMAV+ HPAHAFLQSMPAA
Sbjct: 647  AYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAA 706

Query: 734  GIDGQNVREHASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEASSVWEVAAQKNVYP 555
            G DGQNVR+H S FLDLMHSEDRE KRGLVDAV+DFLHKSGLKEEA SVWEVAAQKNVYP
Sbjct: 707  GPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYP 766

Query: 554  DAVREKSSCYWLINLHVMSDGTAITALSRTLAWFRRQMLISGIGPMRIDIVTGWGRRSRV 375
            DAV+EKS+CYWLINLHVMSDGTA+TALSRTLAWFRRQML SG+GP RIDIVTGWGRRSRV
Sbjct: 767  DAVKEKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNRIDIVTGWGRRSRV 826

Query: 374  TGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 225
            TGSSLVRQ+V+ELLH+F FPFFTEN NSGCFVGCGE L++WL+HSYVERM
Sbjct: 827  TGSSLVRQAVQELLHVFSFPFFTENSNSGCFVGCGEPLSQWLVHSYVERM 876


>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
            predicted protein [Populus trichocarpa]
          Length = 834

 Score =  870 bits (2248), Expect = 0.0
 Identities = 419/531 (78%), Positives = 469/531 (88%)
 Frame = -3

Query: 1817 CSLGVYHGNQVLKRLQDHTVARGFFYWLKRQPGFKHDEHSYTTMVGILGRARQFNAINRL 1638
            C +  Y  NQVLK+LQDHTVA GFF+WLK+ PGFKHD ++YTTMVGILGRA+QF AIN+L
Sbjct: 301  CHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKL 360

Query: 1637 LDEMVEDGSVPNVVTYNRLIHSYGRANYLDEAVNVFYQMQEEGCEPDRVTYCTLIDIHAK 1458
            LD+MV DG  P VVTYNRLIHSYGRANYL++AV VF QMQ+ GCEPDRVTYCTLIDIHAK
Sbjct: 361  LDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAK 420

Query: 1457 SGFLDVALDMYGRMQEAGLTPDTFTYSVIINCLGKAGHLDASYKLFSEMIDQGCVPNLVT 1278
            +GFL+ A++MY RMQ AGL+PDTFTYSV+INCLGKAGHL A+ KLF EMI+QGCVPNLVT
Sbjct: 421  AGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVT 480

Query: 1277 YNIMIALQAKARNYPCALQLYRDMQTVGFQPDKVTYSIVMEVLGHCGHLEEVEIVFTEMK 1098
            YNIMIALQAKARNY  AL+LYRDMQ  GF+PDKVTYSIVMEVLGH G+L+E E +F+EMK
Sbjct: 481  YNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMK 540

Query: 1097 LKNWVPDEPVYGLLVDLWGKAGEVDRARGWYQEMLDAGVRPNVPTCNSLLSAFIRVHRFS 918
             KNWVPDEPVYGLLVDLWGKAG V++A  WYQ ML AG+ PNVPTCNSLLSAF+RV+R  
Sbjct: 541  RKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLP 600

Query: 917  DACNVLHSMPRLGLNPSLQTYTLLLSCCTDTQYFNDMGQCHELMAVTAHPAHAFLQSMPA 738
            DA N+L SM  LGLNPSLQTYTLLLSCCT+ +   DMG   ELM+VT HPAH FL S+P+
Sbjct: 601  DAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTGHPAHMFLSSLPS 660

Query: 737  AGIDGQNVREHASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEASSVWEVAAQKNVY 558
            AG DGQNVR H S FLD+MHSEDRESKRGLVDAV+DFLHKSGLKEEA SVWE+AAQ+NVY
Sbjct: 661  AGPDGQNVRHHVSKFLDMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEIAAQRNVY 720

Query: 557  PDAVREKSSCYWLINLHVMSDGTAITALSRTLAWFRRQMLISGIGPMRIDIVTGWGRRSR 378
            PDAV+EKSSCYWLINLHVMS+GTA+TALSRTLAWFRRQML+SG+ P RIDIVTGWGRRSR
Sbjct: 721  PDAVKEKSSCYWLINLHVMSEGTAVTALSRTLAWFRRQMLVSGVIPSRIDIVTGWGRRSR 780

Query: 377  VTGSSLVRQSVKELLHIFEFPFFTENGNSGCFVGCGESLNRWLLHSYVERM 225
            VTGSSLVRQ+V+ELLHIF FPFFTENGN+GCFVGCGE L+RWLL SYVERM
Sbjct: 781  VTGSSLVRQAVQELLHIFSFPFFTENGNTGCFVGCGEPLSRWLLQSYVERM 831