BLASTX nr result

ID: Coptis21_contig00025849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025849
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278328.2| PREDICTED: filament-like plant protein 7-lik...   115   5e-24
emb|CBI21391.3| unnamed protein product [Vitis vinifera]              115   5e-24
emb|CAN65607.1| hypothetical protein VITISV_042269 [Vitis vinifera]   115   5e-24
ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_003517310.1| PREDICTED: filament-like plant protein 7-lik...   106   3e-21

>ref|XP_002278328.2| PREDICTED: filament-like plant protein 7-like [Vitis vinifera]
          Length = 1111

 Score =  115 bits (289), Expect = 5e-24
 Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 31/199 (15%)
 Frame = +3

Query: 3    VTRREDQRYNADQVDGQLQTDWEITAASEKLAECQETVLNLGKQLKALSSPKETTIFHNG 182
            +T++E   ++ DQ + QL+TDWEITAASEKLAECQET+LNLGKQLKAL+SP E ++  N 
Sbjct: 912  ITKKETPNHDMDQEENQLRTDWEITAASEKLAECQETILNLGKQLKALASPIEASLVDNV 971

Query: 183  IATSPATAT---------------RNRRCTLLDQMLYEDNAKFDKLYEDKPPSITQDIVC 317
            I+T   T T                ++R +LLD+ML ED+A      E K P   +    
Sbjct: 972  ISTPSDTITTTATVTTTSIATNKNMSQRSSLLDRMLAEDDA------ETKDPKSPKTKES 1025

Query: 318  TNNVDPPKSLAH----------PTDVL------ITRCGLNSQVKAASGQAVAIVPSTRCS 449
               +DP KS             P   L      ++  G+ S     +  ++AI+PS + S
Sbjct: 1026 NRTLDPQKSPTRLHANTKPTFSPNGTLELPKKFVSLNGIKSDADDTAVGSLAILPSKKRS 1085

Query: 450  GVSLLRKIVFGRRRESSKK 506
               LLRK+++GR++ +SKK
Sbjct: 1086 SGGLLRKLLWGRKKGNSKK 1104


>emb|CBI21391.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  115 bits (289), Expect = 5e-24
 Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 31/199 (15%)
 Frame = +3

Query: 3   VTRREDQRYNADQVDGQLQTDWEITAASEKLAECQETVLNLGKQLKALSSPKETTIFHNG 182
           +T++E   ++ DQ + QL+TDWEITAASEKLAECQET+LNLGKQLKAL+SP E ++  N 
Sbjct: 54  ITKKETPNHDMDQEENQLRTDWEITAASEKLAECQETILNLGKQLKALASPIEASLVDNV 113

Query: 183 IATSPATAT---------------RNRRCTLLDQMLYEDNAKFDKLYEDKPPSITQDIVC 317
           I+T   T T                ++R +LLD+ML ED+A      E K P   +    
Sbjct: 114 ISTPSDTITTTATVTTTSIATNKNMSQRSSLLDRMLAEDDA------ETKDPKSPKTKES 167

Query: 318 TNNVDPPKSLAH----------PTDVL------ITRCGLNSQVKAASGQAVAIVPSTRCS 449
              +DP KS             P   L      ++  G+ S     +  ++AI+PS + S
Sbjct: 168 NRTLDPQKSPTRLHANTKPTFSPNGTLELPKKFVSLNGIKSDADDTAVGSLAILPSKKRS 227

Query: 450 GVSLLRKIVFGRRRESSKK 506
              LLRK+++GR++ +SKK
Sbjct: 228 SGGLLRKLLWGRKKGNSKK 246


>emb|CAN65607.1| hypothetical protein VITISV_042269 [Vitis vinifera]
          Length = 1124

 Score =  115 bits (289), Expect = 5e-24
 Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 31/199 (15%)
 Frame = +3

Query: 3    VTRREDQRYNADQVDGQLQTDWEITAASEKLAECQETVLNLGKQLKALSSPKETTIFHNG 182
            +T++E   ++ DQ + QL+TDWEITAASEKLAECQET+LNLGKQLKAL+SP E ++  N 
Sbjct: 925  ITKKETPNHDMDQEENQLRTDWEITAASEKLAECQETILNLGKQLKALASPIEASJVDNV 984

Query: 183  IATSPATAT---------------RNRRCTLLDQMLYEDNAKFDKLYEDKPPSITQDIVC 317
            I+T   T T                + R +LLD+ML ED+A      E K P   +    
Sbjct: 985  ISTPSDTITTTATVTTTSIATNKNMSXRSSLLDRMLAEDDA------ETKDPKSPKTKES 1038

Query: 318  TNNVDPPKSLAH----------PTDVL------ITRCGLNSQVKAASGQAVAIVPSTRCS 449
               +DP KS             P   L      ++  G+ S     +  ++AI+PS + S
Sbjct: 1039 NRTLDPQKSPTRLHANTKPTFSPNGTLELPKKFVSLNGIKSDADDTAVGSLAILPSKKWS 1098

Query: 450  GVSLLRKIVFGRRRESSKK 506
               LLRK+++GR++ +SKK
Sbjct: 1099 SGGLLRKLLWGRKKGNSKK 1117


>ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|222856723|gb|EEE94270.1|
            predicted protein [Populus trichocarpa]
          Length = 947

 Score =  112 bits (281), Expect = 4e-23
 Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 17/185 (9%)
 Frame = +3

Query: 3    VTRREDQRYNADQVDGQLQTDWEITAASEKLAECQETVLNLGKQLKALSSPKETTIFHNG 182
            +T+ E       Q + QL+TDWEITAASEKLAECQET+LNLGKQLKAL+SP E  +F   
Sbjct: 759  MTKNEIPNSEVHQDESQLRTDWEITAASEKLAECQETILNLGKQLKALASPSEAALFDKV 818

Query: 183  IATSPATATRN-----------------RRCTLLDQMLYEDNAKFDKLYEDKPPSITQDI 311
            I+TS  T T +                 +R +LLDQML ED    DK+ + K     +  
Sbjct: 819  ISTSTDTNTISVTTSTSTALTPKNKVLIQRSSLLDQMLAEDT---DKVKDTKSVKCKESD 875

Query: 312  VCTNNVDPPKSLAHPTDVLITRCGLNSQVKAASGQAVAIVPSTRCSGVSLLRKIVFGRRR 491
              T++      +  P + ++   G+  Q    +  ++AIVPS +  GV+L RK ++ +++
Sbjct: 876  SNTSSTVISNKVIEPLEKILVLNGIKHQDDGIATNSLAIVPSKKRGGVNLWRKFLWRKKK 935

Query: 492  ESSKK 506
             + KK
Sbjct: 936  SNIKK 940


>ref|XP_003517310.1| PREDICTED: filament-like plant protein 7-like [Glycine max]
          Length = 1078

 Score =  106 bits (265), Expect = 3e-21
 Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
 Frame = +3

Query: 30   NADQVDGQLQTDWEITAASEKLAECQETVLNLGKQLKALSSPKETTIFHNGIATSPATAT 209
            + +Q D  LQTDWEIT+ASEKLAECQET+LNLGKQLKAL++PK+ ++F N IA    T T
Sbjct: 913  DVNQRDEPLQTDWEITSASEKLAECQETILNLGKQLKALAAPKDASLFDNAIAAQCHTVT 972

Query: 210  RNRRCTLLDQMLYEDNAKFDKLYEDKPPSITQDIVCTNNVDPPK--SLAHPTDVLITRCG 383
                  L D  +   ++ FD++  D                P        P + ++   G
Sbjct: 973  DTNIVPLKDTKVKNRSSLFDQMLADDDTKGKVSKASERGSSPTSIPGFKLPLEKILLLNG 1032

Query: 384  LNSQVKAASGQAVAIVPSTRCSGVSLLRKIVFGRRRESSKKTLTM 518
            L  Q  +AS  ++AIVP+ + SG +  R++ FGR++   K  L++
Sbjct: 1033 LKGQDDSASVNSMAIVPAKKSSGRNFWRRL-FGRKKSKKKTQLSL 1076


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