BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025823
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   127   5e-27
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   127   5e-27
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   111   3e-22
ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821...    95   4e-17

>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  127 bits (319), Expect = 5e-27
 Identities = 96/253 (37%), Positives = 122/253 (48%)
 Frame = +3

Query: 3   ELNYVKKHCLNSQVSSDDPLWKLMDISFEAGSSSPPASTLPEVTAPCVVSPLKMNGSQPV 182
           ELNYVKKHC +S ++S DPLWKL+DI  EA       S L         SP+ M GS   
Sbjct: 339 ELNYVKKHCFSSHITSSDPLWKLLDIGVEA------CSNLDASVKVVGCSPM-MEGSSKT 391

Query: 183 IREAKQLISTNLSTRTRTELHLNLSPPSTRPPITLFGRARLACGDSSVLRGQLLPPIKID 362
             E+ QL    +S  T+ E  L+LS PS RPP+TLFG+AR    DS+    Q        
Sbjct: 392 CAES-QLQLVKISAATQKE-QLDLSTPSERPPLTLFGKARFGFQDSTFQHEQ-------- 441

Query: 363 SACQYPETSKKRNSDLQICSSPGNPNCCEENSPHRYPNRSEEQDPVLQIGAPHPQNIXXX 542
                 +T   ++   QI +             +R  N S  QD  L+      + I   
Sbjct: 442 -----EKTMVMKSDPQQIVT-------------NRAENESSSQDVELECENSLEKKIEVD 483

Query: 543 XXXXXXXXXXXAHCKISVEKRLQTVKNTSPSSVGSSKSFNESLRKLYRSMNVSVPRPLPS 722
                            VEK  +  K  S + +  S+ FNESLR LYRSMNVSVP+PLPS
Sbjct: 484 VTEVPSEKL--------VEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPS 535

Query: 723 LVELLESTKRAKR 761
           LVEL+ S KRAK+
Sbjct: 536 LVELMNSNKRAKK 548


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  127 bits (319), Expect = 5e-27
 Identities = 96/253 (37%), Positives = 122/253 (48%)
 Frame = +3

Query: 3    ELNYVKKHCLNSQVSSDDPLWKLMDISFEAGSSSPPASTLPEVTAPCVVSPLKMNGSQPV 182
            ELNYVKKHC +S ++S DPLWKL+DI  EA       S L         SP+ M GS   
Sbjct: 853  ELNYVKKHCFSSHITSSDPLWKLLDIGVEA------CSNLDASVKVVGCSPM-MEGSSKT 905

Query: 183  IREAKQLISTNLSTRTRTELHLNLSPPSTRPPITLFGRARLACGDSSVLRGQLLPPIKID 362
              E+ QL    +S  T+ E  L+LS PS RPP+TLFG+AR    DS+    Q        
Sbjct: 906  CAES-QLQLVKISAATQKE-QLDLSTPSERPPLTLFGKARFGFQDSTFQHEQ-------- 955

Query: 363  SACQYPETSKKRNSDLQICSSPGNPNCCEENSPHRYPNRSEEQDPVLQIGAPHPQNIXXX 542
                  +T   ++   QI +             +R  N S  QD  L+      + I   
Sbjct: 956  -----EKTMVMKSDPQQIVT-------------NRAENESSSQDVELECENSLEKKIEVD 997

Query: 543  XXXXXXXXXXXAHCKISVEKRLQTVKNTSPSSVGSSKSFNESLRKLYRSMNVSVPRPLPS 722
                             VEK  +  K  S + +  S+ FNESLR LYRSMNVSVP+PLPS
Sbjct: 998  VTEVPSEKL--------VEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPS 1049

Query: 723  LVELLESTKRAKR 761
            LVEL+ S KRAK+
Sbjct: 1050 LVELMNSNKRAKK 1062


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  112 bits (279), Expect = 2e-22
 Identities = 90/256 (35%), Positives = 122/256 (47%)
 Frame = +3

Query: 3   ELNYVKKHCLNSQVSSDDPLWKLMDISFEAGSSSPPASTLPEVTAPCVVSPLKMNGSQPV 182
           EL+YVKKHC  ++++ DD LWKL+DI+ EA S +       EVTA  +  P  +   QP+
Sbjct: 339 ELDYVKKHCSGTKLTLDDRLWKLLDINVEASSET-------EVTARVLDYPSVV--EQPI 389

Query: 183 IREAKQLISTNLSTRTRTELHLNLSPPSTRPPITLFGRARLACGDSSVLRGQLLPPIKID 362
              A+   S    T  R    L+LSPPS RP +TLFGRARL   DS V         K+D
Sbjct: 390 QISAQSQSSPVKVTSRRL---LSLSPPSKRPEVTLFGRARLGIPDSVVAH-------KMD 439

Query: 363 SACQYPETSKKRNSDLQICSSPGNPNCCEENSPHRYPNRSEEQDPVLQIGAPHPQNIXXX 542
               +    + +  ++          C              + D   Q G          
Sbjct: 440 QDVSFENEVEVKCENILESKLDTELKC------------ENKLDTTKQCGE--------- 478

Query: 543 XXXXXXXXXXXAHCKISVEKRLQTVKNTSPSSVGSSKSFNESLRKLYRSMNVSVPRPLPS 722
                           SV+K  + +K +  S +GSS++F+E+LRKLYRSMNV VPRPLPS
Sbjct: 479 ----------------SVKK--EVLKFSVRSPIGSSQNFSETLRKLYRSMNVPVPRPLPS 520

Query: 723 LVELLESTKRAKRRVQ 770
           L EL+ S K  KRR +
Sbjct: 521 LSELMNSKKGTKRRFE 536


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  111 bits (278), Expect = 3e-22
 Identities = 88/259 (33%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
 Frame = +3

Query: 3   ELNYVKKHCLNSQVSSDDPLWKLMDISFEAGSSSPPASTLPEVTAPCVVSPLKMNGSQPV 182
           EL Y++KH   +Q++SDDP+WKL+DIS EA   SP A               +  G  P 
Sbjct: 339 ELEYIRKHSFGNQLTSDDPIWKLLDISVEA---SPKAGL-----------SARGIGCSPA 384

Query: 183 IREAKQL-ISTNL-STRTRTELHLNLSPPSTRPPITLFGRARLACGDSSVLRGQLLPPIK 356
            +E KQ  + + L   +  + L ++LSPPS RP +TLFGRARL   DS+ L         
Sbjct: 385 GKEPKQTSVESQLPPVKVSSSLLMSLSPPSKRPAVTLFGRARLWIQDSNFL--------- 435

Query: 357 IDSACQYPETSKKRNSDLQICSSPGNPNCCEENSPHRYPNRSEEQDPVLQIGAPHPQNIX 536
                   E      +D  I +         E++  +  N+ E    +   G        
Sbjct: 436 -------SEEKLAIPTDQVIANEVDREVGVVEDTIMKCENKLECNSGIHVAG-------- 480

Query: 537 XXXXXXXXXXXXXAHCKISVEKRLQTVKNTSPSSVGSSKSFNESLRKLYRSMNVSVPRPL 716
                         HC+  V+K  +  K  S S++ SS++ +E+LRKLYRSMNV +PRPL
Sbjct: 481 --------------HCEKFVKK--EPHKIVSSSTIRSSRNSSETLRKLYRSMNVPLPRPL 524

Query: 717 PSLVELLESTKRAKRRVQF 773
           PSLV+L ++ KR KRR+ F
Sbjct: 525 PSLVDLKDADKRNKRRMGF 543


>ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821385 [Brachypodium
            distachyon]
          Length = 622

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 76/280 (27%), Positives = 115/280 (41%), Gaps = 25/280 (8%)
 Frame = +3

Query: 3    ELNYVKKHCLNSQVSSDDPLWKLMDISFEAGSSSPPASTLPEVTAPCVVSPLKMNGSQPV 182
            EL+YVKK C  +++++DDPLWK+     +   SSP +     +       P         
Sbjct: 334  ELSYVKKRCFKTRLTADDPLWKIFRDPLQKSVSSPSSVLASGMQTD--EDPSTFVDDDHP 391

Query: 183  IREAKQLISTNLSTRTRTELHLNLSPPSTRPPITLFGRARLACGDSSVLRGQLLPPIKID 362
              + ++L   ++ T    EL    SPP   P ITLFGRAR       ++  +L      D
Sbjct: 392  TSDIEELSDLDVCT---LELKFVPSPPVQEPEITLFGRARFGSQAIDIMEEELRHQYISD 448

Query: 363  SACQYPETSKKRNSDLQICSSPGNPNCCEENSPHRYPNRSEEQDPV-------------- 500
               +    +   +  ++  ++    N   E  P    + +E  D V              
Sbjct: 449  EETRLCAPTDLVHVHIEGVATYSGVNLITEQPPASQEDPTEAGDEVPSSQCNAAPIVPEA 508

Query: 501  ----------LQIGAP-HPQNIXXXXXXXXXXXXXXAHCKISVEKRLQTVKNTSPSSVGS 647
                      L +  P  P+                +  ++         +   P  +GS
Sbjct: 509  FEVQPLPTIQLNVSVPDQPEKSETIIEPKSISDTESSSLRVVSSAEKTNCQMDLPCVIGS 568

Query: 648  SKSFNESLRKLYRSMNVSVPRPLPSLVELLESTKRAKRRV 767
            SKSFN SL++LYRS N+ VPRPLPSLV LLES+KR K R+
Sbjct: 569  SKSFNPSLKRLYRSRNIPVPRPLPSLVGLLESSKRVKLRL 608