BLASTX nr result

ID: Coptis21_contig00025819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025819
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis tha...    55   2e-09
emb|CBI19992.3| unnamed protein product [Vitis vinifera]               52   1e-06

>ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis thaliana]
           gi|45477081|sp|P92567.1|M1410_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01410;
           AltName: Full=ORF204 gi|1785791|emb|CAA69788.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 204

 Score = 54.7 bits (130), Expect(2) = 2e-09
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
 Frame = -2

Query: 722 RQVLVYLFEVM*VLIDGSFXXXXXXXXXXXXLFFLPWVKRPR--SSLCFLAGQALGYHSS 549
           R  LV+LFEV+  L D SF            +F +P+VK  R  S +CF+AGQ LGYH S
Sbjct: 41  RWPLVFLFEVVQYLFDRSFASSVVNSAFACNIFEVPFVKLKRRFSQVCFVAGQPLGYHGS 100

Query: 548 WP--ALTHPI 525
           WP  AL+H I
Sbjct: 101 WPTFALSHHI 110



 Score = 34.3 bits (77), Expect(2) = 2e-09
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -3

Query: 796 FHQTSPLD*LIGNLVCYSFNLQSATDR 716
           F+QT P D L+G+   +SF+L+SATDR
Sbjct: 15  FNQTQPFDRLVGSRHSFSFDLKSATDR 41


>emb|CBI19992.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = -2

Query: 713 LVYLFEVM*VLIDGSFXXXXXXXXXXXXLFFLPWVKRPRSSLCFLAGQALGYHSSWP--A 540
           LV LFE+M  L D SF            +F +P+VKR  S + F+AGQ LGY++SWP  A
Sbjct: 57  LVLLFEIMCYLFDRSFASSVVNSVLAWNIFEIPFVKRKFSHISFMAGQPLGYYTSWPLFA 116

Query: 539 LTHP 528
           L+ P
Sbjct: 117 LSPP 120



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 796 FHQTSPLD*LIGNLVCYSFNLQSATD 719
           F Q  PLD L+G    Y F+L+ ATD
Sbjct: 28  FDQLKPLDRLVGEQKTYCFDLKFATD 53