BLASTX nr result
ID: Coptis21_contig00025819
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025819 (1125 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis tha... 55 2e-09 emb|CBI19992.3| unnamed protein product [Vitis vinifera] 52 1e-06 >ref|NP_085590.1| hypothetical protein ArthMp112 [Arabidopsis thaliana] gi|45477081|sp|P92567.1|M1410_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg01410; AltName: Full=ORF204 gi|1785791|emb|CAA69788.1| unnamed protein product [Arabidopsis thaliana] Length = 204 Score = 54.7 bits (130), Expect(2) = 2e-09 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = -2 Query: 722 RQVLVYLFEVM*VLIDGSFXXXXXXXXXXXXLFFLPWVKRPR--SSLCFLAGQALGYHSS 549 R LV+LFEV+ L D SF +F +P+VK R S +CF+AGQ LGYH S Sbjct: 41 RWPLVFLFEVVQYLFDRSFASSVVNSAFACNIFEVPFVKLKRRFSQVCFVAGQPLGYHGS 100 Query: 548 WP--ALTHPI 525 WP AL+H I Sbjct: 101 WPTFALSHHI 110 Score = 34.3 bits (77), Expect(2) = 2e-09 Identities = 15/27 (55%), Positives = 21/27 (77%) Frame = -3 Query: 796 FHQTSPLD*LIGNLVCYSFNLQSATDR 716 F+QT P D L+G+ +SF+L+SATDR Sbjct: 15 FNQTQPFDRLVGSRHSFSFDLKSATDR 41 >emb|CBI19992.3| unnamed protein product [Vitis vinifera] Length = 176 Score = 51.6 bits (122), Expect(2) = 1e-06 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Frame = -2 Query: 713 LVYLFEVM*VLIDGSFXXXXXXXXXXXXLFFLPWVKRPRSSLCFLAGQALGYHSSWP--A 540 LV LFE+M L D SF +F +P+VKR S + F+AGQ LGY++SWP A Sbjct: 57 LVLLFEIMCYLFDRSFASSVVNSVLAWNIFEIPFVKRKFSHISFMAGQPLGYYTSWPLFA 116 Query: 539 LTHP 528 L+ P Sbjct: 117 LSPP 120 Score = 28.1 bits (61), Expect(2) = 1e-06 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 796 FHQTSPLD*LIGNLVCYSFNLQSATD 719 F Q PLD L+G Y F+L+ ATD Sbjct: 28 FDQLKPLDRLVGEQKTYCFDLKFATD 53