BLASTX nr result

ID: Coptis21_contig00025806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025806
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...   117   1e-24
emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]   117   1e-24
ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...   109   4e-22
ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816...   100   1e-19
ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/98 (58%), Positives = 70/98 (71%)
 Frame = +1

Query: 277 PQISARQYVSSNAMLSSTVVAWSPVLRLSLETDSTHLNSLPNYFSLLSVGGKSGKISFWR 456
           P ++  QY S NAMLSS VVAWSPVL L  ETDS   ++  N FSLL+VGGKSGKISFWR
Sbjct: 209 PLVTVNQYASRNAMLSSLVVAWSPVLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWR 268

Query: 457 IHEPQSYSIVQNGVHVDVIHVGLLQAHNGWITAICWEI 570
           +HEP SY++  + V + V+  G  QAHN W+TAI W +
Sbjct: 269 VHEPLSYTVEHSRVPISVMLAGFHQAHNTWVTAISWAL 306


>emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]
          Length = 829

 Score =  117 bits (294), Expect = 1e-24
 Identities = 57/98 (58%), Positives = 70/98 (71%)
 Frame = +1

Query: 277 PQISARQYVSSNAMLSSTVVAWSPVLRLSLETDSTHLNSLPNYFSLLSVGGKSGKISFWR 456
           P ++  QY S NAMLSS VVAWSPVL L  ETDS   ++  N FSLL+VGGKSGKISFWR
Sbjct: 209 PLVTVNQYASRNAMLSSLVVAWSPVLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWR 268

Query: 457 IHEPQSYSIVQNGVHVDVIHVGLLQAHNGWITAICWEI 570
           +HEP SY++  + V + V+  G  QAHN W+TAI W +
Sbjct: 269 VHEPLSYTVEHSRVPISVMLAGFHQAHNTWVTAISWAL 306


>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223536298|gb|EEF37949.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 847

 Score =  109 bits (272), Expect = 4e-22
 Identities = 56/102 (54%), Positives = 67/102 (65%)
 Frame = +1

Query: 277 PQISARQYVSSNAMLSSTVVAWSPVLRLSLETDSTHLNSLPNYFSLLSVGGKSGKISFWR 456
           PQI+A QY S +AMLSS VVAWSP+L LS +      N  P  FSL++VGGKSG IS WR
Sbjct: 272 PQITADQYASRSAMLSSVVVAWSPLLCLSSKISLVSQNDSPRRFSLIAVGGKSGNISLWR 331

Query: 457 IHEPQSYSIVQNGVHVDVIHVGLLQAHNGWITAICWEIFAIN 582
           I  PQSYSI    +   V+ VGLLQAHN W+TA+ +     N
Sbjct: 332 IDAPQSYSIEHGWLPTSVMLVGLLQAHNSWVTAVNFAFLGSN 373


>ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816957 [Glycine max]
          Length = 839

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/100 (53%), Positives = 66/100 (66%)
 Frame = +1

Query: 283 ISARQYVSSNAMLSSTVVAWSPVLRLSLETDSTHLNSLPNYFSLLSVGGKSGKISFWRIH 462
           +SA QY S +AML S VV+WSP+LRL+ E     L  + +  SLL+VGGKSGKIS WR H
Sbjct: 194 LSADQYASRSAMLCSLVVSWSPLLRLASE-----LYPVCDSVSLLAVGGKSGKISLWRFH 248

Query: 463 EPQSYSIVQNGVHVDVIHVGLLQAHNGWITAICWEIFAIN 582
            P+ Y+I    V   V  VGLLQAHN W+T I W +FA +
Sbjct: 249 PPECYTIEDREVPTTVKFVGLLQAHNSWVTTISWLLFAFD 288


>ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|222858478|gb|EEE96025.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score =  100 bits (250), Expect = 1e-19
 Identities = 54/94 (57%), Positives = 62/94 (65%)
 Frame = +1

Query: 277 PQISARQYVSSNAMLSSTVVAWSPVLRLSLETDSTHLNSLPNYFSLLSVGGKSGKISFWR 456
           P I+A +Y S  AMLSS V+AWSPVL L  +  S   N   N FS+L+VGGKSGKIS WR
Sbjct: 244 PLITAEKYASRCAMLSSLVIAWSPVLWLPSKICSAPENDSSNGFSILAVGGKSGKISVWR 303

Query: 457 IHEPQSYSIVQNGVHVDVIHVGLLQAHNGWITAI 558
           I+ PQ YSI    V   V  VGLLQAHN W+T I
Sbjct: 304 INVPQYYSIEHGRVPTTVTFVGLLQAHNSWVTTI 337


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