BLASTX nr result

ID: Coptis21_contig00025803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025803
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614078.1| HGWP repeat containing protein-like protein ...    55   8e-06
emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]    55   8e-06
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_003614078.1| HGWP repeat containing protein-like protein [Medicago truncatula]
           gi|355515413|gb|AES97036.1| HGWP repeat containing
           protein-like protein [Medicago truncatula]
          Length = 514

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/85 (34%), Positives = 43/85 (50%)
 Frame = +3

Query: 111 FIPAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISF 290
           F P +   E +++RPE +    WV  VE+   PE   + KRN     KQI  H  G ++F
Sbjct: 274 FDPTLSKNEIVNNRPENVPLDHWVKFVEYRLKPETMEMCKRNKEARKKQIFNHTCGTMTF 333

Query: 291 PQFEEIMSQEAGAPPTLGDLFVRTH 365
            +   I++ EAG P   G ++  TH
Sbjct: 334 ARKRHILTLEAGKPVGRGPMWDMTH 358


>emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]
          Length = 1163

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
 Frame = +3

Query: 117  PAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISFPQ 296
            P    EE +  RP  LS  +W  L+ FW TPE + IS +N AN AKQ+ KH +   S+ Q
Sbjct: 929  PYNTDEERLCQRPPHLSDDDWRWLIHFWGTPEAKDISDKNKANRAKQVIKHTSRSKSYAQ 988

Query: 297  F-------EEIMSQEAG 326
                    ++++SQ  G
Sbjct: 989  IRYEQDQVQQLLSQPEG 1005


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = +3

Query: 111 FIPAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISF 290
           + P    EE ++ R  ++  ++W  L+ +W++ E Q  S +N AN + Q + H AG  SF
Sbjct: 98  YYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQKSTHTAGSKSF 157

Query: 291 PQF--EEIMSQEAGAPPTLGDLFVRTHT 368
            +   EE   +  G  PT  +L+++T T
Sbjct: 158 ARIREEERTKKSGGKEPTRAELYIKTRT 185


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