BLASTX nr result
ID: Coptis21_contig00025803
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025803 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003614078.1| HGWP repeat containing protein-like protein ... 55 8e-06 emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera] 55 8e-06 ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2... 54 1e-05 >ref|XP_003614078.1| HGWP repeat containing protein-like protein [Medicago truncatula] gi|355515413|gb|AES97036.1| HGWP repeat containing protein-like protein [Medicago truncatula] Length = 514 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/85 (34%), Positives = 43/85 (50%) Frame = +3 Query: 111 FIPAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISF 290 F P + E +++RPE + WV VE+ PE + KRN KQI H G ++F Sbjct: 274 FDPTLSKNEIVNNRPENVPLDHWVKFVEYRLKPETMEMCKRNKEARKKQIFNHTCGTMTF 333 Query: 291 PQFEEIMSQEAGAPPTLGDLFVRTH 365 + I++ EAG P G ++ TH Sbjct: 334 ARKRHILTLEAGKPVGRGPMWDMTH 358 >emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera] Length = 1163 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%) Frame = +3 Query: 117 PAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISFPQ 296 P EE + RP LS +W L+ FW TPE + IS +N AN AKQ+ KH + S+ Q Sbjct: 929 PYNTDEERLCQRPPHLSDDDWRWLIHFWGTPEAKDISDKNKANRAKQVIKHTSRSKSYAQ 988 Query: 297 F-------EEIMSQEAG 326 ++++SQ G Sbjct: 989 IRYEQDQVQQLLSQPEG 1005 >ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1| predicted protein [Populus trichocarpa] Length = 327 Score = 54.3 bits (129), Expect = 1e-05 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%) Frame = +3 Query: 111 FIPAMPHEESISHRPEQLSQQEWV*LVEFWDTPEHQAISKRNWANCAKQIAKHAAGRISF 290 + P EE ++ R ++ ++W L+ +W++ E Q S +N AN + Q + H AG SF Sbjct: 98 YYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQKSTHTAGSKSF 157 Query: 291 PQF--EEIMSQEAGAPPTLGDLFVRTHT 368 + EE + G PT +L+++T T Sbjct: 158 ARIREEERTKKSGGKEPTRAELYIKTRT 185