BLASTX nr result

ID: Coptis21_contig00025798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025798
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   144   6e-33
ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion chann...   142   3e-32
ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   140   8e-32
ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   140   1e-31

>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/102 (66%), Positives = 83/102 (81%)
 Frame = +2

Query: 2   IQRATKCLRNQCRGTPGCGPKTLSCEEPIFYFGTAMLNDRARLAWAENKTARTICIESPD 181
           IQRA KCL+ QC  TPGCG   LSC+EPI+Y  T  + ++AR AWA+NK AR++C++SP 
Sbjct: 226 IQRAAKCLKEQCIETPGCGLGLLSCKEPIYYGTTRKVMEKARWAWADNKLARSMCLDSP- 284

Query: 182 DQFDYGVYKWTVQLVANHNRFEKMLFPIFWGLMTLSTFGNLE 307
           D++DYG YKWTVQLV N +R EK+LFPIFWGLMTLSTFGNLE
Sbjct: 285 DKYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLE 326


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = +2

Query: 2   IQRATKCLRNQCRGTPGCGPKTLSCEEPIFYFGTAMLNDRARLAWAENKTARTICIESPD 181
           IQR  KCL+ +CR T GCG + LSC+EPI+Y   + + D ARLAWA+NK AR  C++S D
Sbjct: 278 IQRTAKCLKEKCRETQGCGLRLLSCKEPIYYGTASKVRDGARLAWADNKVARATCLDSSD 337

Query: 182 DQFDYGVYKWTVQLVANHNRFEKMLFPIFWGLMTLSTFGNLE 307
           + +DYG YKWTVQLV N +R EK+LFPIFWGLMTLSTFGNLE
Sbjct: 338 N-YDYGAYKWTVQLVTNGSRLEKILFPIFWGLMTLSTFGNLE 378


>ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 683

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/102 (61%), Positives = 81/102 (79%)
 Frame = +2

Query: 2   IQRATKCLRNQCRGTPGCGPKTLSCEEPIFYFGTAMLNDRARLAWAENKTARTICIESPD 181
           +QRA KCL  QC  T GCG +TL C+EPI+Y G  ++ D+ RL WA+N+ AR+ C++S D
Sbjct: 274 LQRAAKCLEEQCAKTTGCGLRTLCCKEPIYYGGINIVRDKTRLLWAQNREARSTCLDSAD 333

Query: 182 DQFDYGVYKWTVQLVANHNRFEKMLFPIFWGLMTLSTFGNLE 307
           + +DYGVY+W+VQLV N +R EK+LFPIFWGLMTLSTFGNLE
Sbjct: 334 N-YDYGVYEWSVQLVTNDSRLEKILFPIFWGLMTLSTFGNLE 374


>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/103 (64%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   IQRATKCLRNQCRGTPGCGPKTLSCEEPIFYFGTAML-NDRARLAWAENKTARTICIESP 178
           IQRA KCL+ QC  T GCG K LSC+ PI+Y   ++L  D+ARLAWAEN+  R  C+  P
Sbjct: 280 IQRAAKCLKVQCAKTSGCGMKILSCQTPIYYGSNSLLVRDKARLAWAENREVRHTCLNGP 339

Query: 179 DDQFDYGVYKWTVQLVANHNRFEKMLFPIFWGLMTLSTFGNLE 307
           D  ++YG Y+WTVQLV N NR EK+LFPIFWGLMTLSTFGNLE
Sbjct: 340 DS-YNYGAYRWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLE 381


>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/102 (61%), Positives = 80/102 (78%)
 Frame = +2

Query: 2   IQRATKCLRNQCRGTPGCGPKTLSCEEPIFYFGTAMLNDRARLAWAENKTARTICIESPD 181
           +QRA KCL+ +C     C  KTL+C+ PI+Y  T++L DRARLAWA NK AR+ C++S D
Sbjct: 258 LQRAAKCLKEECAVANYCSTKTLACKNPIYYGTTSLLKDRARLAWANNKHARSTCLDSAD 317

Query: 182 DQFDYGVYKWTVQLVANHNRFEKMLFPIFWGLMTLSTFGNLE 307
           + F+YG Y+WT+QLV N NR EK+LFP+FWGLMTLSTFGNLE
Sbjct: 318 N-FEYGGYRWTIQLVTNDNRLEKILFPLFWGLMTLSTFGNLE 358


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