BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025794
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula...    57   5e-11
ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    55   5e-11
ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|1...    57   6e-11
gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis]             54   9e-11
ref|XP_002440840.1| hypothetical protein SORBIDRAFT_09g008090 [S...    55   1e-10

>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
           gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 333

 Score = 57.0 bits (136), Expect(2) = 5e-11
 Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 209 EGTPRSVCDKRGKNR--HDVLTIQCNIKLFFSSSDRKELKLWVVGCGLWRI*S*EGAT*P 382
           EGTPRS+ D   K R  HD L IQ N+ LFFS  DRKELKL V G  +W+         P
Sbjct: 269 EGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG-RIWK-----EQQNP 322

Query: 383 MGCMCIHNLCS 415
            G +CI NLCS
Sbjct: 323 DGGVCIPNLCS 333



 Score = 35.4 bits (80), Expect(2) = 5e-11
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +1

Query: 61  VFNCFGQYFGLPFEDFQLRMA 123
           VF+CFGQYF L FE FQL MA
Sbjct: 214 VFHCFGQYFCLHFEAFQLGMA 234


>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|297742353|emb|CBI34502.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score = 55.1 bits (131), Expect(2) = 5e-11
 Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +2

Query: 209 EGTPRSVCD--KRGKNRHDVLTIQCNIKLFFSSSDRKELKLWVVGCGLWRI*S*EGAT*P 382
           EGTPRS+ D  K+ ++ HD L IQ N+ LFFS  DRKELKL V G  +W+         P
Sbjct: 252 EGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG-RIWK-----EQQNP 305

Query: 383 MGCMCIHNLCS 415
              +CI NLCS
Sbjct: 306 DAGVCIPNLCS 316



 Score = 37.4 bits (85), Expect(2) = 5e-11
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1

Query: 61  VFNCFGQYFGLPFEDFQLRMA 123
           VFNCFGQYF L FE FQL MA
Sbjct: 197 VFNCFGQYFCLHFEAFQLGMA 217


>ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|118486216|gb|ABK94950.1|
           unknown [Populus trichocarpa]
           gi|222844358|gb|EEE81905.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score = 56.6 bits (135), Expect(2) = 6e-11
 Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = +2

Query: 209 EGTPRSVCDKRGKNR--HDVLTIQCNIKLFFSSSDRKELKLWVVGCGLWRI*S*EGAT*P 382
           EGTPRS+ D   K R  HD L IQ N+ LFFS  DRKELKL V G  +W+         P
Sbjct: 266 EGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG-RIWK-----EQQNP 319

Query: 383 MGCMCIHNLCS 415
            G  CI NLCS
Sbjct: 320 EGGACIPNLCS 330



 Score = 35.4 bits (80), Expect(2) = 6e-11
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +1

Query: 61  VFNCFGQYFGLPFEDFQLRMA 123
           VF+CFGQYF L FE FQL MA
Sbjct: 211 VFHCFGQYFCLHFEAFQLGMA 231


>gb|AEQ94181.1| ubiquitin ligase SINAT3 [Elaeis guineensis]
          Length = 196

 Score = 54.3 bits (129), Expect(2) = 9e-11
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = +2

Query: 209 EGTPRSVCDKRGKNR--HDVLTIQCNIKLFFSSSDRKELKLWVVGCGLWRI*S*EGAT*P 382
           EGTPRS+ D   K R  HD L IQ N+ LFFS  DRKELKL + G  +W+         P
Sbjct: 132 EGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITG-RIWK-----EQQNP 185

Query: 383 MGCMCIHNLCS 415
              +CI NLCS
Sbjct: 186 DSGVCIPNLCS 196



 Score = 37.4 bits (85), Expect(2) = 9e-11
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1

Query: 61  VFNCFGQYFGLPFEDFQLRMA 123
           VFNCFGQYF L FE FQL MA
Sbjct: 77  VFNCFGQYFCLHFEAFQLGMA 97


>ref|XP_002440840.1| hypothetical protein SORBIDRAFT_09g008090 [Sorghum bicolor]
           gi|241946125|gb|EES19270.1| hypothetical protein
           SORBIDRAFT_09g008090 [Sorghum bicolor]
          Length = 353

 Score = 55.5 bits (132), Expect(2) = 1e-10
 Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 209 EGTPRSVCDKRGKNR--HDVLTIQCNIKLFFSSSDRKELKLWVVGCGLWRI*S*EGAT*P 382
           EGTPRS+ D   K R  HD L IQ N+ LFFS  DRKELKL V G  +W+       T P
Sbjct: 290 EGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG-RIWK-----EQTNP 343

Query: 383 MGCMCIHNLCS 415
            G  CI NLCS
Sbjct: 344 DGA-CIPNLCS 353



 Score = 35.8 bits (81), Expect(2) = 1e-10
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +1

Query: 61  VFNCFGQYFGLPFEDFQLRMA 123
           VF+CFGQYF L FE FQL MA
Sbjct: 235 VFHCFGQYFCLHFEAFQLAMA 255