BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025793
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   125   5e-27
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   114   8e-24
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   114   8e-24
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...   114   8e-24
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   114   1e-23

>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/149 (40%), Positives = 89/149 (59%)
 Frame = -2

Query: 448  RNTKYFHLSTIYRRRKNRILKLRTQEGEWKQGRKEVGEVINDFFGELYGSETP*ADPEIM 269
            RNT+YFHL   +R RKN I KLR  +G      +E+GE+   FF +LY  +      E++
Sbjct: 602  RNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELL 661

Query: 268  ALFQPVITERENGLLTEVPTDSEIWKVVKQMGALKSPGPDGFQGIFYQKCWDIVGETVVA 89
             +F+P IT+  NG+LT+  TD EI   + Q+G LK+PGPDGF   F+Q+ W ++   V+ 
Sbjct: 662  NMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKRDVIE 721

Query: 88   TVKDFFSFGHLNPSLNETFIALIPKIANP 2
             V++FF  G     +N+T I +IPK   P
Sbjct: 722  GVREFFETGEWKEGMNDTVIVMIPKTNAP 750


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/149 (39%), Positives = 88/149 (59%)
 Frame = -2

Query: 448  RNTKYFHLSTIYRRRKNRILKLRTQEGEWKQGRKEVGEVINDFFGELYGSETP*ADPEIM 269
            RNT++FH  T  R   NR++ ++ +EG   +G KE+G    +FF ++Y S          
Sbjct: 732  RNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDF 791

Query: 268  ALFQPVITERENGLLTEVPTDSEIWKVVKQMGALKSPGPDGFQGIFYQKCWDIVGETVVA 89
            A F+P++TE+ N  LT+  +D EI+  +  +G  K+PGPDG    FY+ CW+IVG  V+ 
Sbjct: 792  AGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIK 851

Query: 88   TVKDFFSFGHLNPSLNETFIALIPKIANP 2
             VK FF   ++  S+N T I +IPKI NP
Sbjct: 852  EVKIFFRTSYMKQSINHTNICMIPKITNP 880


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/149 (39%), Positives = 88/149 (59%)
 Frame = -2

Query: 448  RNTKYFHLSTIYRRRKNRILKLRTQEGEWKQGRKEVGEVINDFFGELYGSETP*ADPEIM 269
            RNT++FH  T  R   NR++ ++ +EG   +G KE+G    +FF ++Y S          
Sbjct: 712  RNTEFFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDF 771

Query: 268  ALFQPVITERENGLLTEVPTDSEIWKVVKQMGALKSPGPDGFQGIFYQKCWDIVGETVVA 89
            A F+P++TE+ N  LT+  +D EI+  +  +G  K+PGPDG    FY+ CW+IVG  V+ 
Sbjct: 772  AGFKPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIK 831

Query: 88   TVKDFFSFGHLNPSLNETFIALIPKIANP 2
             VK FF   ++  S+N T I +IPKI NP
Sbjct: 832  EVKIFFRTSYMKQSINHTNICMIPKITNP 860


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
 Frame = -2

Query: 448 RNTKYFHLSTIYRRRKNRILKLRTQEGEWKQGRKEVGEVINDFFGELYGSETP*ADPEIM 269
           RNT YFH +TI RRR+NR+ +L  +EG W    KE+  +   ++  LY  +      +++
Sbjct: 107 RNTNYFHTTTIIRRRQNRVERLHNEEGTWIFDAKELEALAVQYYQRLYSMD------DVL 160

Query: 268 ALFQPV-------ITERENGLLTEVPTDSEIWKVVKQMGALKSPGPDGFQGIFYQKCWDI 110
            +  P+       +T  E   L +    +E+   ++ MG  K+PGPDG+Q IFYQ CW++
Sbjct: 161 QVVNPLPQDGLERLTREEVLSLNKPFLATEVEVAIRSMGKYKAPGPDGYQPIFYQSCWEV 220

Query: 109 VGETVVATVKDFFSFGHLNPSLNETFIALIPKIANP 2
           VG +V+    DFFS G L P  N+  + LIPK+  P
Sbjct: 221 VGNSVIRFALDFFSSGILPPQTNDALVVLIPKVPKP 256


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/149 (36%), Positives = 88/149 (59%)
 Frame = -2

Query: 448 RNTKYFHLSTIYRRRKNRILKLRTQEGEWKQGRKEVGEVINDFFGELYGSETP*ADPEIM 269
           RNT++FH   ++R +KN+I KLR  +G      KE+  +  ++F  L+ ++       + 
Sbjct: 429 RNTRFFHSKAVWRAKKNKITKLRDSDGTVHNTTKELESMATEYFQRLFTADPSIDHSRVT 488

Query: 268 ALFQPVITERENGLLTEVPTDSEIWKVVKQMGALKSPGPDGFQGIFYQKCWDIVGETVVA 89
           +L +P +T+  N  L +  ++ EI   + Q+G LK+PGPDGF G FYQ+ W I+ + +V 
Sbjct: 489 SLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVR 548

Query: 88  TVKDFFSFGHLNPSLNETFIALIPKIANP 2
            V++FFS G +   +NET I LIPK   P
Sbjct: 549 AVQEFFSSGTMPSGVNETAIVLIPKTEQP 577