BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025776
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    71   6e-10
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    70   1e-09
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    68   5e-09
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    64   6e-08
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    63   2e-07

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 7/252 (2%)
 Frame = -2

Query: 979 KILQSCNGLLLYNSSQFLNQSTGEVFVCDPLTKEYVKLPSYVPTKGPEVVKNFGMNLVFD 800
           +ILQSCNGL   +S  + N S  + ++ +P TK++  LP   P  G  V +  G+NL FD
Sbjct: 97  EILQSCNGLFCCSSVDY-NDSERKYYIYNPTTKQFTTLP---PLCGRSVRRVLGVNLAFD 152

Query: 799 PSKSLHYKVVAVYEIEVTTSEGFEFXXXXXXXXXXXXXSWGISRRYYRVPNVSTLSAGIL 620
           PSKS  YKVV V   + +      +              W +S   +  P      +G+ 
Sbjct: 153 PSKSHTYKVVCVQRCKSS------YDHCQIQISSLETGPWRVSGVPFAAPISVDFPSGVY 206

Query: 619 VNDSLFWPPDGDGEYLHYYNVQLEVLVSWKLPPKLPVCKYRSWHYLGGLVDKVYLIE--- 449
            N ++ W    +     Y+++  E++    +PP       R     G     ++L+E   
Sbjct: 207 WNGAIHWISPREASL--YFDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYE 264

Query: 448 ----QICSYESWHAYRFIGYELRIDLSLMAESFSFVIEPSKYKDATEQIMFPWFRAICIH 281
               Q   YE    +     + R+DL+ +A +F  +IE   Y +  + +    F  +CI 
Sbjct: 265 SSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIE--GYHEEYDYMYS--FSVLCIV 320

Query: 280 RLDEEDFLFVGI 245
           R ++E+  F+ +
Sbjct: 321 RREKEEDSFLAL 332


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
            gi|296090309|emb|CBI40128.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 77/298 (25%), Positives = 121/298 (40%), Gaps = 23/298 (7%)
 Frame = -2

Query: 1042 IPNPAFDFIV------------NWDIVMSKGAFKILQSCNGLLLYNSSQFLNQSTGEVFV 899
            +PN  FDFI             + D +      K+LQ CNGLL  ++ + L  S    ++
Sbjct: 89   LPNSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRSLGTSRN-YYI 147

Query: 898  CDPLTKEYVKLPSYVPTKGPEVVKNFGMNLVFDPSKSLHYKVVAVYEIEVTTSEGFEFXX 719
            C+  T+ +  LP    + G + V  FG+NL FDPSKS +Y V+ V   EV+ S       
Sbjct: 148  CNLATRRFSVLPPPCSSGGRDTV--FGINLAFDPSKSPYYSVICVRSCEVSISH------ 199

Query: 718  XXXXXXXXXXXSWGISRRYYRVPNVSTLSAGILVNDSLFW-PPDGDGEYLHYYNVQLEVL 542
                        W +S + +R P       G+  N ++ W  P G   Y      +++ +
Sbjct: 200  YQIEIYSSGTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWISPSGASLYFGIDEGRIDTM 259

Query: 541  VSWKLPPKLPVCKYRSWHYLGGLVDKVYLIE-------QICSYESWHAYRFIGYELRIDL 383
                 PP       R   + G     +++IE       Q   YE    Y   G    +DL
Sbjct: 260  P--PPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDYSNWGVRFSVDL 317

Query: 382  SLMAESFSFVIEPSKYKDATEQIMFPWFRAICIHR--LDEEDF-LFVGIECMIYSINI 218
              +  +F  + +   Y DA   + +  +  +C+ R   +EEDF L + I   I   NI
Sbjct: 318  DKVIAAFPEITQ--NYLDA-HDLYYYAYNVLCLIRGGGNEEDFSLLLQIRGKIICYNI 372


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 83/315 (26%), Positives = 122/315 (38%), Gaps = 22/315 (6%)
 Frame = -2

Query: 979 KILQSCNGLLLYNSSQFLNQSTGEVFVCDPLTKEYVKLPSYV-PTKGPEVVKNFGMNLVF 803
           KILQSCNGLLL ++   + Q     ++ +P TK+   LPS V           FG+NL F
Sbjct: 101 KILQSCNGLLLCSTLPKIGQKRN-YYISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAF 159

Query: 802 DPSKSLHYKVVAV---------YEIEVTTSEGFEFXXXXXXXXXXXXXSWGISRRYYRVP 650
           DP KS +YKV+ V         Y+IE   SE                 +W +S   +  P
Sbjct: 160 DPLKSCNYKVICVRSTTNSIYQYQIETYQSE---------------IAAWRLSGLPFVAP 204

Query: 649 NVSTLSAGILVNDSLFWPPDGDGEYLHYYNVQLEVLVSWKLPPKLPVC---KYRSWHYLG 479
                  G+  N ++ W     G  + Y+++  E + S    PKLP       R + Y G
Sbjct: 205 FDMVFDNGVFWNGAIHW-ISATGNAI-YFDMDRECISSM---PKLPFSYEWGKRRFRYFG 259

Query: 478 GLVDKVYLIE-------QICSYESWHAYRFIGYELRIDLSLMAESFSFVIEPSKYKDATE 320
                ++LIE       Q   YE    Y F     R+ L  +  +F  ++    Y DA +
Sbjct: 260 ESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYRVQLDHVVAAFPEMVR--SYLDAGD 317

Query: 319 QIMFPWFRAICIHR-LDEEDFLFVGIECMIYSINISQPQCVIKKVGLFSHLVQSSEGSRM 143
              + +     +     EE  L + I   + S N+       KKV   S+    S     
Sbjct: 318 SNYYAFVVLSLVEEDATEESSLLLHIPGKVISYNLKNK--TFKKVCELSYGTGGSRTKES 375

Query: 142 FSREW-DVIPYSNSL 101
               W D   Y  +L
Sbjct: 376 LQFGWLDAYQYIETL 390


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 16/308 (5%)
 Frame = -2

Query: 976 ILQSCNGLLLYNSSQFLNQSTGEVFVCDPLTKEYVKLPSYVPTKGPEVVKNFGMNLVFDP 797
           I  SCNGLLL +S +  ++   + ++C P TK+Y +LP      G ++V  FG+N+ +DP
Sbjct: 128 IQHSCNGLLLCSSFR-CHEDDRKYYICKPTTKQYHQLPK----PGCKIV--FGINIAYDP 180

Query: 796 SKSLHYKVVAVYEIEVTTSEGFEFXXXXXXXXXXXXXSWGISRRYYRVPNVSTLSAGILV 617
           + S HYK++ V +                        SW +S  +    +V   + G+ +
Sbjct: 181 TISPHYKIICVCDSNA------------IKMYDSAIGSWRVSGNHQVFSHVLLFNRGVFL 228

Query: 616 NDSLFWPPDGDGEYLHYYNVQLEVLVSWKLPPKLPVCKYRSWHYLGGLVDKVYLIE---- 449
           N +L W     G     ++++ E +++  +PP       R   Y G     + LIE    
Sbjct: 229 NRALHW--ISRGALALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEIYGP 286

Query: 448 -----QICSYESWHAYRFIGYELRIDLSLMAESFSFVIEPSKYKDATEQIMFPWFRAICI 284
                 +   ES ++   + Y  R+DLS +A SF     PS  ++  + I    F    +
Sbjct: 287 ITTCFDVMRMESDYSGWSVRY--RVDLSRIASSF-----PSMARNNVQDIHRYLFS--IL 337

Query: 283 HRLD------EEDFLFVGIECMIYSINISQPQCVIKKVGLFSHLVQSSEGSRMFSREWD- 125
           H  D      +E  +++ I     S N+   +    K+    H +   E        W+ 
Sbjct: 338 HLADRSQVGEDESSMWLHIPGTFISYNLKDGKW--SKLQSILHQINKIEEGMGLWHSWEG 395

Query: 124 VIPYSNSL 101
           V PY+N+L
Sbjct: 396 VHPYTNTL 403


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 84/344 (24%), Positives = 136/344 (39%), Gaps = 12/344 (3%)
 Frame = -2

Query: 1213 SNPSFRRRHTLYFHRYSLSRFLPSILLQDHKAANSLKAGEPLSLLLNRDDRWRAPSLIPN 1034
            SNP+F  R T+  H        PS +        S     P   +    +  R P   P+
Sbjct: 50   SNPNFSHRRTISHHPNPT----PSGIFFPRPTPKS----PPFDFINFTTNPSRPPFESPH 101

Query: 1033 PAFDFIVNWDIVMSKGAFKILQSCNGLLL---YNSSQFLNQSTGEVFVCDPLTKEYVKLP 863
             A D          K  F ILQSCNGL L   YN     N ST + ++ +P T  + KLP
Sbjct: 102  FADD----------KHGFLILQSCNGLFLCSTYNG----NYSTRDFYIHNPTTNHHTKLP 147

Query: 862  SYVPTKGPEVVKNFGMNLVFDPSKSLHYKVVAVYEIEVTTSEGFEFXXXXXXXXXXXXXS 683
                    +V   FG+NL FDP +S  YKV+ V   +  T + F+               
Sbjct: 148  YL------QVGAVFGLNLAFDPLRSSDYKVICVRYSDAYT-DTFQI-----EMYSSVTGP 195

Query: 682  WGISRRYYRVPNVSTLSAGILVNDSLFWPPDGDGEYLHYYNVQLEVLVSWKLPPKLPVCK 503
            W   +  +  P      +G+  N+++ W    +     Y++++ E +    +P      +
Sbjct: 196  WRPVQGVFSAPLSVRFDSGVYWNNAVHWISTSENSL--YFDLREEKVHDLPMPGVPDGQE 253

Query: 502  YRSWHYLGGLVDKVYLIE---------QICSYESWHAYRFIGYELRIDLSLMAESFSFVI 350
             R   Y G     ++LIE          +   +  H   F+ Y  R+DL  ++  F  +I
Sbjct: 254  QRRVKYFGTCGGNLHLIEIYEAQEMELNVYQMQDDHCGWFVRY--RVDLRGVSVVFPEMI 311

Query: 349  EPSKYKDATEQIMFPWFRAICIHRLDEEDFLFVGIECMIYSINI 218
             PS  +D  +  +FP F    +    EE  + + ++  I  +N+
Sbjct: 312  -PS--EDDADLGLFPKFSVAAVVEGIEEASVVLEVDGKIVRVNV 352