BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025730
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   244   6e-63
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   240   1e-61
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   236   2e-60
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   236   2e-60
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   234   6e-60

>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  244 bits (623), Expect = 6e-63
 Identities = 119/175 (68%), Positives = 150/175 (85%), Gaps = 2/175 (1%)
 Frame = -3

Query: 521 PKNEEEKDIET--IFHIVNSSESTQNLKDSLKSTQIYLSNSLIDGVLKRVRFSHANPLQA 348
           P+N   KDI+   I++I+++S S+QNLK SLKST ++LSN LID VLKRVRFSH NPLQA
Sbjct: 33  PQNHNNKDIQVDAIYNIISNSTSSQNLKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQA 92

Query: 347 LDFFNYTAKKSEFFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVL 168
           LDFFN+TA +  F+H+SYS DT+LYILGR+RKFD +W+VL+++++KD++LIT RT+QVVL
Sbjct: 93  LDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVL 152

Query: 167 ARVAKVCSVRKTVESFRRFRKMVLVFDTSYYNGLLRTLCQEKSMSDARNVYHCLK 3
            RVAKVCSVR TVESF +F+++V VFDTS +N LLRTLCQEKSMSDARNVYH LK
Sbjct: 153 GRVAKVCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLK 207


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/166 (68%), Positives = 144/166 (86%)
 Frame = -3

Query: 500 DIETIFHIVNSSESTQNLKDSLKSTQIYLSNSLIDGVLKRVRFSHANPLQALDFFNYTAK 321
           D+ET+F IV+S+ ST+NLK SLKS+ ++LSN LID VLKRVRFSH NP QAL FFNYT K
Sbjct: 59  DVETVFRIVSSASSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTNK 118

Query: 320 KSEFFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSV 141
           +  F+HT +S DT+LYILGR+R+FD++WE+LV+MR+KD+SLI+ R+VQVVL R+AKVCSV
Sbjct: 119 RKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSV 178

Query: 140 RKTVESFRRFRKMVLVFDTSYYNGLLRTLCQEKSMSDARNVYHCLK 3
           ++TVESFR+F+K+V  FDT+ +N LLRTLCQEKSM DARNVYH LK
Sbjct: 179 KQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLK 224


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  236 bits (602), Expect = 2e-60
 Identities = 113/174 (64%), Positives = 145/174 (83%)
 Frame = -3

Query: 524 TPKNEEEKDIETIFHIVNSSESTQNLKDSLKSTQIYLSNSLIDGVLKRVRFSHANPLQAL 345
           T      ++IET+F I+ +S S+ ++K SL+S++++LSN LIDGVLKRVRFSH NPLQAL
Sbjct: 33  TDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQAL 92

Query: 344 DFFNYTAKKSEFFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLA 165
           +FFNYTAK+  F+HTS+S DT+LYILGR+RKFDK+W+VL++++ KD SLI+ RTV VVL 
Sbjct: 93  EFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLG 152

Query: 164 RVAKVCSVRKTVESFRRFRKMVLVFDTSYYNGLLRTLCQEKSMSDARNVYHCLK 3
           R+AKVCSVR+TVESFR+F+K V  FD + +N LLRTLCQEKSM DARNVYH LK
Sbjct: 153 RIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLK 206


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  236 bits (602), Expect = 2e-60
 Identities = 113/174 (64%), Positives = 145/174 (83%)
 Frame = -3

Query: 524 TPKNEEEKDIETIFHIVNSSESTQNLKDSLKSTQIYLSNSLIDGVLKRVRFSHANPLQAL 345
           T      ++IET+F I+ +S S+ ++K SL+S++++LSN LIDGVLKRVRFSH NPLQAL
Sbjct: 33  TDNQSLHQNIETVFRIITTSSSSTDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQAL 92

Query: 344 DFFNYTAKKSEFFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLA 165
           +FFNYTAK+  F+HTS+S DT+LYILGR+RKFDK+W+VL++++ KD SLI+ RTV VVL 
Sbjct: 93  EFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLG 152

Query: 164 RVAKVCSVRKTVESFRRFRKMVLVFDTSYYNGLLRTLCQEKSMSDARNVYHCLK 3
           R+AKVCSVR+TVESFR+F+K V  FD + +N LLRTLCQEKSM DARNVYH LK
Sbjct: 153 RIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLK 206


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  234 bits (597), Expect = 6e-60
 Identities = 112/166 (67%), Positives = 139/166 (83%)
 Frame = -3

Query: 500 DIETIFHIVNSSESTQNLKDSLKSTQIYLSNSLIDGVLKRVRFSHANPLQALDFFNYTAK 321
           D+E ++ I+ SS S QNLK SL ST I+LSN LID VLKRVRFSH NPLQAL+FF YT  
Sbjct: 38  DVEVVYRIITSSSSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTDN 97

Query: 320 KSEFFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSV 141
           +  F+HT YS DT+LYILGR+RKFD +W+VL++M++KD+ LI+ RT+Q+VLARVAK+CSV
Sbjct: 98  RKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSV 157

Query: 140 RKTVESFRRFRKMVLVFDTSYYNGLLRTLCQEKSMSDARNVYHCLK 3
           R+TVESFR+F+K V V DT+ +N LLRTLCQEKSM+DARNVYH LK
Sbjct: 158 RQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLK 203