BLASTX nr result

ID: Coptis21_contig00025721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025721
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [...    99   4e-19
ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [...    98   1e-18
emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]    98   1e-18
ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trich...    94   1e-17
ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trich...    92   8e-17

>ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
           gi|302143344|emb|CBI21905.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -2

Query: 585 GELVVSKVFYQTQPRQCSSIIRDSVPSKEKARH-GHEGPSFKDTSLADYYNPTALIAYDQ 409
           GELVVSKVFYQTQPRQCSSI++DS+PSK K  H GHE P+ ++ +L +YYNP + I++DQ
Sbjct: 209 GELVVSKVFYQTQPRQCSSIMKDSLPSKLKDHHSGHESPNLRNNALVEYYNPNSFISFDQ 268

Query: 408 SGHNMRTIPSQLLPNFVVNAGGSSFL 331
              N R   ++L+PNF V+  GS+FL
Sbjct: 269 GSQN-RLSHARLIPNFTVH-DGSTFL 292


>ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
          Length = 312

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
 Frame = -2

Query: 585 GELVVSKVFYQTQPRQCSSIIRDSVPSKEKARHGHEGPSFKDTSLADYYNPTALIAYDQS 406
           GELVVSKVFYQTQPRQC   I+DS+ +K  +R  H+GP  K  +L +YY+P + I+YDQ 
Sbjct: 209 GELVVSKVFYQTQPRQCGLSIKDSLDNKSNSRSAHDGPIIKSAALVEYYHP-SFISYDQV 267

Query: 405 GHNMRTIPSQLLPNFVVNAGGSSF--LP*ESCNGNERSEAGRR 283
            HN R  P QL+PN VV   GSSF  L  ++  GN R     R
Sbjct: 268 SHN-RESPPQLIPNLVVQGDGSSFIRLAADASKGNLRGNRDGR 309


>emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]
          Length = 796

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
 Frame = -2

Query: 585 GELVVSKVFYQTQPRQCSSIIRDSVPSKEKARHGHEGPSFKDTSLADYYNPTALIAYDQS 406
           GELVVSKVFYQTQPRQC   I+DS+ +K  +R  H+GP  K  +L +YY+P + I+YDQ 
Sbjct: 693 GELVVSKVFYQTQPRQCGLSIKDSLDNKSNSRSAHDGPIIKSAALVEYYHP-SFISYDQV 751

Query: 405 GHNMRTIPSQLLPNFVVNAGGSSF--LP*ESCNGNERSEAGRR 283
            HN R  P QL+PN VV   GSSF  L  ++  GN R     R
Sbjct: 752 SHN-RESPPQLIPNLVVQGDGSSFIRLAADASKGNLRGNRDGR 793


>ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222837440|gb|EEE75819.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 299

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 54/93 (58%), Positives = 70/93 (75%), Gaps = 7/93 (7%)
 Frame = -2

Query: 585 GELVVSKVFYQTQPRQCSSIIRD--SVPSKEKAR-HGHEGPSFKD-TSLADYYNPTALIA 418
           GELVVSKVFYQTQPRQC S+I+D  SVPSK K +  GHEG + K+ T+L +YY+P++ I+
Sbjct: 208 GELVVSKVFYQTQPRQCGSLIKDSVSVPSKLKVQSSGHEGSNLKNSTTLVEYYHPSSFIS 267

Query: 417 YDQSGHNMRTIPS---QLLPNFVVNAGGSSFLP 328
           +DQSG N  T P+   QLL +F V+  GSSF+P
Sbjct: 268 FDQSGQNRSTNPNPPQQLLSHFAVH-DGSSFIP 299


>ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222852670|gb|EEE90217.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 298

 Score = 91.7 bits (226), Expect = 8e-17
 Identities = 52/93 (55%), Positives = 67/93 (72%), Gaps = 7/93 (7%)
 Frame = -2

Query: 585 GELVVSKVFYQTQPRQCSSIIRDSVPSKEKAR---HGHEGPSFKD-TSLADYYNPTALIA 418
           GELVVSKVFYQTQPRQC S+I+DSVP   K +    GHEG + K+ T+L +YYNP + I+
Sbjct: 208 GELVVSKVFYQTQPRQCGSLIKDSVPVPSKLKVQSSGHEGSNLKNSTTLVEYYNP-SFIS 266

Query: 417 YDQSGHNMRTIPS---QLLPNFVVNAGGSSFLP 328
           +DQSG N  T P+   QLLP+F ++  GSS +P
Sbjct: 267 FDQSGQNRSTNPNPPQQLLPHFALH-DGSSLIP 298


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