BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025690
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subuni...   115   4e-24
ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subuni...   114   1e-23
emb|CAN71416.1| hypothetical protein VITISV_029547 [Vitis vinifera]   113   2e-23
ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subuni...   110   2e-22
ref|XP_002522469.1| E3 ubiquitin ligase apc2, putative [Ricinus ...   100   2e-19

>ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subunit 2-like [Vitis
           vinifera] gi|296086344|emb|CBI31933.3| unnamed protein
           product [Vitis vinifera]
          Length = 883

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/90 (62%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = +3

Query: 114 ATSNYYNLNILDSISTESIQDILTSWAGFCTTTESLLD-KGDLSVGSDFISHVHVLIQHR 290
           A S+  +L ILDS+   SI +I+ SW GFC  TE+LL+  GDLSVGS+F+SHVH L +  
Sbjct: 3   AASSVSDLGILDSVDDASITEIMESWDGFCRATEALLNGHGDLSVGSEFVSHVHSLCKRS 62

Query: 291 LTSLVQDHFFKSLQETFEKNGATIFWRHFD 380
           L SLVQDHF +SL+ETFE+NGAT FWRHFD
Sbjct: 63  LGSLVQDHFLRSLEETFERNGATRFWRHFD 92


>ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 883

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = +3

Query: 126 YYNLNILDSISTESIQDILTSWAGFCTTTESLL-DKGDLSVGSDFISHVHVLIQHRLTSL 302
           ++N  ILDS++ +S+ +IL S+  FC  T+SLL   GDLSV SDF+SHVH L +HRL SL
Sbjct: 8   FFNPAILDSLTDDSVHEILDSYNDFCNATQSLLAGNGDLSVASDFVSHVHTLCKHRLRSL 67

Query: 303 VQDHFFKSLQETFEKNGATIFWRHFD 380
           VQDHFF+ L+ETFE+NGA+ FWRHFD
Sbjct: 68  VQDHFFRLLEETFERNGASRFWRHFD 93


>emb|CAN71416.1| hypothetical protein VITISV_029547 [Vitis vinifera]
          Length = 793

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/90 (61%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
 Frame = +3

Query: 114 ATSNYYNLNILDSISTESIQDILTSWAGFCTTTESLLD-KGDLSVGSDFISHVHVLIQHR 290
           A S+  +L ILDS+   SI +I+ SW GFC  TE+LL+  GDLSVGS+F+SHVH L +  
Sbjct: 3   AASSVSDLGILDSVDDASITEIMESWDGFCRATEALLNGHGDLSVGSEFVSHVHSLCKRS 62

Query: 291 LTSLVQDHFFKSLQETFEKNGATIFWRHFD 380
           L SLVQDHF +SL+ETFE+NGA  FWRHFD
Sbjct: 63  LGSLVQDHFLRSLEETFERNGAXRFWRHFD 92


>ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 882

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/85 (61%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 129 YNLNILDSISTESIQDILTSWAGFCTTTESLL-DKGDLSVGSDFISHVHVLIQHRLTSLV 305
           +N  ILDS++ +++Q+IL  + GFC  T+SLL   GDLSV  DF+S VHVL +HRL SLV
Sbjct: 9   FNPAILDSLTDDAVQEILDGYNGFCNATQSLLVGNGDLSVAPDFVSLVHVLCKHRLRSLV 68

Query: 306 QDHFFKSLQETFEKNGATIFWRHFD 380
           QDHFF+ L+ETFE+NGA+ FWRHFD
Sbjct: 69  QDHFFRLLEETFERNGASRFWRHFD 93


>ref|XP_002522469.1| E3 ubiquitin ligase apc2, putative [Ricinus communis]
           gi|223538354|gb|EEF39961.1| E3 ubiquitin ligase apc2,
           putative [Ricinus communis]
          Length = 883

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +3

Query: 132 NLNILDSISTESIQDILTSWAGFCTTTESLLD-KGDLSVGSDFISHVHVLIQHRLTSLVQ 308
           NL ILD+IS +S  +I   +AGFC     LL+  GDLS+G   +SH+H L +H L SLV 
Sbjct: 10  NLGILDTISDDSFHEIAERYAGFCAACSGLLNGNGDLSLGPRLVSHIHSLCKHGLQSLVL 69

Query: 309 DHFFKSLQETFEKNGATIFWRHFD 380
           DHFFKSL+ETF+KNG++ FW+HFD
Sbjct: 70  DHFFKSLEETFKKNGSSKFWQHFD 93