BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025681
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    71   8e-11
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    70   1e-10
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    68   9e-10
emb|CAN64191.1| hypothetical protein VITISV_016956 [Vitis vinifera]    60   2e-07

>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +2

Query: 2   HNMTIYKWPESVATVAGCVLRNFLWTGNVDRESLTRKIVTVSWDKCCKPYEEGRLGIRRL 181
           H   +Y+WP S+       +RNFLWTG+V      +K+VTV W  CCKP  EG +G++RL
Sbjct: 190 HTFMMYRWPSSLLKSIEKAIRNFLWTGSVSY----KKLVTVKWGHCCKPISEGGIGLKRL 245

Query: 182 RDLNLALLMKLTW 220
             LN  +L ++ W
Sbjct: 246 DVLNRTMLCRIAW 258


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/73 (45%), Positives = 44/73 (60%)
 Frame = +2

Query: 2   HNMTIYKWPESVATVAGCVLRNFLWTGNVDRESLTRKIVTVSWDKCCKPYEEGRLGIRRL 181
           H +TIY WP  +        RNF+W+G++ +    RK+VTV+W K CKP  +G LGIR L
Sbjct: 455 HTITIYDWPSFLLKELETCFRNFIWSGDITK----RKLVTVAWKKLCKPQSQGGLGIRSL 510

Query: 182 RDLNLALLMKLTW 220
             LN A  +KL W
Sbjct: 511 SQLNAAGNLKLCW 523


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/75 (41%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   HNMTIYKWPESVATVAGCVLRNFLWTGNVDRESLTRKIVTVSWDKCCKPYEEGRLGIRRL 181
           H++T+Y WP S+       ++NF+W+G+  +    RK+VTV+W K C+P+++G L IR L
Sbjct: 90  HSITVYNWPTSLLKDLEKSIKNFIWSGDTSK----RKLVTVAWKKLCRPFDQGGLRIRSL 145

Query: 182 RDLNLALLMKLTWHI 226
             LN A  +KL W+I
Sbjct: 146 IQLNSASNLKLCWNI 160


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/75 (41%), Positives = 47/75 (62%)
 Frame = +2

Query: 2   HNMTIYKWPESVATVAGCVLRNFLWTGNVDRESLTRKIVTVSWDKCCKPYEEGRLGIRRL 181
           H M+IY WP  +       ++NF+W+G+V +    RK+VTV+W K C  YEEG LG++ L
Sbjct: 549 HTMSIYSWPIKILKEMEKWIKNFIWSGDVTK----RKMVTVAWRKICADYEEGGLGVKSL 604

Query: 182 RDLNLALLMKLTWHI 226
             LN A  +K+ W++
Sbjct: 605 ICLNEATNLKICWNL 619


>emb|CAN64191.1| hypothetical protein VITISV_016956 [Vitis vinifera]
          Length = 868

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = +2

Query: 2    HNMTIYKWPESVATVAGCVLRNFLWTGNVDRESLTRKIVTVSWDKCCKPYEEGRLGIRRL 181
            +NM++++ P+SVA     + R+FLW G     SL RK+  + W+  C   E+G LGIR++
Sbjct: 791  YNMSLFRMPKSVANRLEKLQRDFLWGGG----SLERKVYLIKWEVVCTQKEKGGLGIRKI 846

Query: 182  RDLNLALLMKLTWHICFIK 238
              LN ALL K  W     K
Sbjct: 847  DPLNKALLGKWLWRFAVEK 865