BLASTX nr result

ID: Coptis21_contig00025671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025671
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155380.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    77   1e-12
ref|XP_004135445.1| PREDICTED: uncharacterized membrane protein ...    77   1e-12
ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein ...    75   4e-12
emb|CBI22257.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_004155380.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein
           YLR241W-like [Cucumis sativus]
          Length = 712

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/56 (66%), Positives = 46/56 (82%)
 Frame = +3

Query: 210 LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377
           L+A  K++  S FNLERLIPS +W+++AW LSE+ELLS SGLD VVFM+I TFSLK
Sbjct: 41  LVAEGKTKRRSDFNLERLIPSANWLKKAWMLSEEELLSSSGLDAVVFMRIVTFSLK 96


>ref|XP_004135445.1| PREDICTED: uncharacterized membrane protein YLR241W-like [Cucumis
           sativus]
          Length = 712

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/56 (66%), Positives = 46/56 (82%)
 Frame = +3

Query: 210 LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377
           L+A  K++  S FNLERLIPS +W+++AW LSE+ELLS SGLD VVFM+I TFSLK
Sbjct: 41  LVAEGKTKRRSDFNLERLIPSANWLKKAWMLSEEELLSSSGLDAVVFMRIVTFSLK 96


>ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein YLR241W-like [Vitis
           vinifera]
          Length = 717

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
 Frame = +3

Query: 195 NIHSV---LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFT 365
           NIH     L+A  KSQ ++ FNL+RL+PS  WV RAW+ SE++LLS SGLD VVFM+IF 
Sbjct: 33  NIHVYAPRLVAEGKSQRTNHFNLDRLLPSAGWVTRAWQPSEEDLLSTSGLDAVVFMRIFI 92

Query: 366 FSLK 377
           FSL+
Sbjct: 93  FSLR 96


>emb|CBI22257.3| unnamed protein product [Vitis vinifera]
          Length = 917

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
 Frame = +3

Query: 195 NIHSV---LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFT 365
           NIH     L+A  KSQ ++ FNL+RL+PS  WV RAW+ SE++LLS SGLD VVFM+IF 
Sbjct: 33  NIHVYAPRLVAEGKSQRTNHFNLDRLLPSAGWVTRAWQPSEEDLLSTSGLDAVVFMRIFI 92

Query: 366 FSLK 377
           FSL+
Sbjct: 93  FSLR 96


>ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|222848347|gb|EEE85894.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = +3

Query: 210 LIANDKSQI--SSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377
           L+  +KSQ   S  F LERL+PS  WVR AW+LSEDE+LSISGLDG+V  +IFTFSLK
Sbjct: 41  LVDKEKSQPQESDDFYLERLLPSAGWVRNAWQLSEDEILSISGLDGLVLTRIFTFSLK 98


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