BLASTX nr result
ID: Coptis21_contig00025671
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025671 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155380.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 77 1e-12 ref|XP_004135445.1| PREDICTED: uncharacterized membrane protein ... 77 1e-12 ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein ... 75 4e-12 emb|CBI22257.3| unnamed protein product [Vitis vinifera] 75 4e-12 ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 >ref|XP_004155380.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein YLR241W-like [Cucumis sativus] Length = 712 Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/56 (66%), Positives = 46/56 (82%) Frame = +3 Query: 210 LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377 L+A K++ S FNLERLIPS +W+++AW LSE+ELLS SGLD VVFM+I TFSLK Sbjct: 41 LVAEGKTKRRSDFNLERLIPSANWLKKAWMLSEEELLSSSGLDAVVFMRIVTFSLK 96 >ref|XP_004135445.1| PREDICTED: uncharacterized membrane protein YLR241W-like [Cucumis sativus] Length = 712 Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/56 (66%), Positives = 46/56 (82%) Frame = +3 Query: 210 LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377 L+A K++ S FNLERLIPS +W+++AW LSE+ELLS SGLD VVFM+I TFSLK Sbjct: 41 LVAEGKTKRRSDFNLERLIPSANWLKKAWMLSEEELLSSSGLDAVVFMRIVTFSLK 96 >ref|XP_002278752.2| PREDICTED: uncharacterized membrane protein YLR241W-like [Vitis vinifera] Length = 717 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%) Frame = +3 Query: 195 NIHSV---LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFT 365 NIH L+A KSQ ++ FNL+RL+PS WV RAW+ SE++LLS SGLD VVFM+IF Sbjct: 33 NIHVYAPRLVAEGKSQRTNHFNLDRLLPSAGWVTRAWQPSEEDLLSTSGLDAVVFMRIFI 92 Query: 366 FSLK 377 FSL+ Sbjct: 93 FSLR 96 >emb|CBI22257.3| unnamed protein product [Vitis vinifera] Length = 917 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%) Frame = +3 Query: 195 NIHSV---LIANDKSQISSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFT 365 NIH L+A KSQ ++ FNL+RL+PS WV RAW+ SE++LLS SGLD VVFM+IF Sbjct: 33 NIHVYAPRLVAEGKSQRTNHFNLDRLLPSAGWVTRAWQPSEEDLLSTSGLDAVVFMRIFI 92 Query: 366 FSLK 377 FSL+ Sbjct: 93 FSLR 96 >ref|XP_002305383.1| predicted protein [Populus trichocarpa] gi|222848347|gb|EEE85894.1| predicted protein [Populus trichocarpa] Length = 716 Score = 75.1 bits (183), Expect = 6e-12 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = +3 Query: 210 LIANDKSQI--SSGFNLERLIPSTSWVRRAWELSEDELLSISGLDGVVFMQIFTFSLK 377 L+ +KSQ S F LERL+PS WVR AW+LSEDE+LSISGLDG+V +IFTFSLK Sbjct: 41 LVDKEKSQPQESDDFYLERLLPSAGWVRNAWQLSEDEILSISGLDGLVLTRIFTFSLK 98