BLASTX nr result
ID: Coptis21_contig00025654
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025654 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513424.1| conserved hypothetical protein [Ricinus comm... 81 1e-13 ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]... 73 2e-11 gb|ABY75920.1| At1g04390-like protein [Arabidopsis lyrata] 73 3e-11 emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera] 73 3e-11 emb|CBI21782.3| unnamed protein product [Vitis vinifera] 72 4e-11 >ref|XP_002513424.1| conserved hypothetical protein [Ricinus communis] gi|223547332|gb|EEF48827.1| conserved hypothetical protein [Ricinus communis] Length = 1016 Score = 80.9 bits (198), Expect = 1e-13 Identities = 43/86 (50%), Positives = 56/86 (65%) Frame = -2 Query: 259 LLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQGFIDGSK 80 LLS Q + SC TALN + L L A+ + +VW+IL E++ V IV C++ F D + Sbjct: 134 LLSSHQVEVSRSCTTALNMIFLNLSAKK---EKQVWDILIETETVSRIVGCIKEFSDCAM 190 Query: 79 PFECFQKMASLLETILSRWPPSRYPV 2 ECFQ+M+SLL TIL RWPPSRY V Sbjct: 191 SIECFQEMSSLLGTILHRWPPSRYSV 216 >ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata] gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata] Length = 978 Score = 73.2 bits (178), Expect = 2e-11 Identities = 42/93 (45%), Positives = 57/93 (61%) Frame = -2 Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101 LV S S LLS Q + CA ALN +L+ + + EVW+IL+E+K V +V LQ Sbjct: 119 LVESLSPLLSCQQFDVSLPCAVALNAILVNVRETK---EKEVWKILEEAKTVVSVVGNLQ 175 Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2 F++G+ E FQ+MA LL TI+ +WP SRY V Sbjct: 176 NFLEGNMSVEWFQEMALLLSTIMLKWPRSRYSV 208 >gb|ABY75920.1| At1g04390-like protein [Arabidopsis lyrata] Length = 211 Score = 72.8 bits (177), Expect = 3e-11 Identities = 43/93 (46%), Positives = 56/93 (60%) Frame = -2 Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101 LV S S LLS Q + CA ALN +L+ + + EVW+IL+E+K V +V LQ Sbjct: 90 LVESLSPLLSCQQFDVSLPCAVALNAILVNVRETK---EKEVWKILEEAKTVVSVVGNLQ 146 Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2 F +GS E FQ+MA LL TI+ +WP SRY V Sbjct: 147 NFSEGSMSVEWFQEMALLLSTIMLKWPRSRYSV 179 >emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera] Length = 1637 Score = 72.8 bits (177), Expect = 3e-11 Identities = 42/93 (45%), Positives = 56/93 (60%) Frame = -2 Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101 L+ FS LLS Q + + CA LN +L L SL+ +WEILKE+ AV ++ +Q Sbjct: 302 LIQPFSSLLSSHQVKVASRCANGLNHILPYL---SLKKDGVIWEILKETNAVIHVINNIQ 358 Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2 F G + + FQ+MASLL IL +WPPSRY V Sbjct: 359 KFSXGMESIKYFQRMASLLRRILWQWPPSRYRV 391 >emb|CBI21782.3| unnamed protein product [Vitis vinifera] Length = 871 Score = 72.4 bits (176), Expect = 4e-11 Identities = 42/93 (45%), Positives = 56/93 (60%) Frame = -2 Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101 L+ FS LLS Q + + CA LN +L L SL+ +WEILKE+ AV ++ +Q Sbjct: 43 LIQPFSSLLSSHQVKVASRCANGLNHILPYL---SLKKDGVIWEILKETNAVIHVINNIQ 99 Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2 F G + + FQ+MASLL IL +WPPSRY V Sbjct: 100 KFSRGMESIKYFQRMASLLRRILWQWPPSRYRV 132