BLASTX nr result

ID: Coptis21_contig00025654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025654
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513424.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]...    73   2e-11
gb|ABY75920.1| At1g04390-like protein [Arabidopsis lyrata]             73   3e-11
emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera]    73   3e-11
emb|CBI21782.3| unnamed protein product [Vitis vinifera]               72   4e-11

>ref|XP_002513424.1| conserved hypothetical protein [Ricinus communis]
           gi|223547332|gb|EEF48827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1016

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/86 (50%), Positives = 56/86 (65%)
 Frame = -2

Query: 259 LLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQGFIDGSK 80
           LLS  Q  +  SC TALN + L L A+    + +VW+IL E++ V  IV C++ F D + 
Sbjct: 134 LLSSHQVEVSRSCTTALNMIFLNLSAKK---EKQVWDILIETETVSRIVGCIKEFSDCAM 190

Query: 79  PFECFQKMASLLETILSRWPPSRYPV 2
             ECFQ+M+SLL TIL RWPPSRY V
Sbjct: 191 SIECFQEMSSLLGTILHRWPPSRYSV 216


>ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]
           gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 978

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/93 (45%), Positives = 57/93 (61%)
 Frame = -2

Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101
           LV S S LLS  Q  +   CA ALN +L+ +       + EVW+IL+E+K V  +V  LQ
Sbjct: 119 LVESLSPLLSCQQFDVSLPCAVALNAILVNVRETK---EKEVWKILEEAKTVVSVVGNLQ 175

Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2
            F++G+   E FQ+MA LL TI+ +WP SRY V
Sbjct: 176 NFLEGNMSVEWFQEMALLLSTIMLKWPRSRYSV 208


>gb|ABY75920.1| At1g04390-like protein [Arabidopsis lyrata]
          Length = 211

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/93 (46%), Positives = 56/93 (60%)
 Frame = -2

Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101
           LV S S LLS  Q  +   CA ALN +L+ +       + EVW+IL+E+K V  +V  LQ
Sbjct: 90  LVESLSPLLSCQQFDVSLPCAVALNAILVNVRETK---EKEVWKILEEAKTVVSVVGNLQ 146

Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2
            F +GS   E FQ+MA LL TI+ +WP SRY V
Sbjct: 147 NFSEGSMSVEWFQEMALLLSTIMLKWPRSRYSV 179


>emb|CAN74130.1| hypothetical protein VITISV_015701 [Vitis vinifera]
          Length = 1637

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/93 (45%), Positives = 56/93 (60%)
 Frame = -2

Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101
           L+  FS LLS  Q  + + CA  LN +L  L   SL+    +WEILKE+ AV  ++  +Q
Sbjct: 302 LIQPFSSLLSSHQVKVASRCANGLNHILPYL---SLKKDGVIWEILKETNAVIHVINNIQ 358

Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2
            F  G +  + FQ+MASLL  IL +WPPSRY V
Sbjct: 359 KFSXGMESIKYFQRMASLLRRILWQWPPSRYRV 391


>emb|CBI21782.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/93 (45%), Positives = 56/93 (60%)
 Frame = -2

Query: 280 LVGSFSYLLSFPQSLLVTSCATALNCVLLKLGARSLRSQSEVWEILKESKAVECIVYCLQ 101
           L+  FS LLS  Q  + + CA  LN +L  L   SL+    +WEILKE+ AV  ++  +Q
Sbjct: 43  LIQPFSSLLSSHQVKVASRCANGLNHILPYL---SLKKDGVIWEILKETNAVIHVINNIQ 99

Query: 100 GFIDGSKPFECFQKMASLLETILSRWPPSRYPV 2
            F  G +  + FQ+MASLL  IL +WPPSRY V
Sbjct: 100 KFSRGMESIKYFQRMASLLRRILWQWPPSRYRV 132


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