BLASTX nr result

ID: Coptis21_contig00025618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025618
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-15
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    50   5e-10
dbj|BAD25968.1| hypothetical protein [Oryza sativa Japonica Group]     68   5e-09
gb|EAZ44588.1| hypothetical protein OsJ_29211 [Oryza sativa Japo...    68   5e-09
gb|EAZ08952.1| hypothetical protein OsI_31218 [Oryza sativa Indi...    68   5e-09

>ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|222859444|gb|EEE96991.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
 Frame = +1

Query: 262 EVCIVSCKEKVYLFFFG---GVTVVDV-YDSRASIKTSEMKWNECSIPEAIRKTNFYVES 429
           ++ I++C E +Y   F    G+T+VD+  D R S  T +   + C          + VE+
Sbjct: 167 DIYILTCYEHLYSVKFNKSCGITLVDLKVDDRTSPLTRKFH-SYCP--------TYLVET 217

Query: 430 CGEIFQVNQIHSMLSREIFLTFDIFKLDLSTMDWVKVESLGDR-IFXXXXXXXXXXXGA- 603
           CGE  +V   H  +     +   ++KLD +   W+++++L D+ IF              
Sbjct: 218 CGEFLRV---HCYILHGQLMDISVYKLDFNERVWIRIKNLKDQAIFIGSSGAQVLACSTK 274

Query: 604 ELGVKGNCVYYSIPNYTHLYRFDMDDGAITVTLPLPNV-LNWKGPFWMVP 750
           E  ++GN +Y ++P    LY +D+D   + V LP PNV  +W    W++P
Sbjct: 275 ESRIQGNRIYLTLPEDRTLYVYDLDLCGLEVCLPCPNVKADWIQNDWILP 324



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 12  SIQCYLFNPVSLKKIILPPLI-DNTFDVGILTYPPSDPNCVVMLFSQKKRLCTF--CRIG 182
           S  C+L NP+S KKI LP L  D T+   +L+ PP  P CVVM  +    +     C+ G
Sbjct: 77  SDDCFLLNPISTKKIQLPSLAPDFTWTDCVLSSPPHRPECVVMFLNFGYGILNVKSCKPG 136

Query: 183 DTKWIEQEL 209
           D +W  Q+L
Sbjct: 137 DVEWTGQDL 145


>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 50.4 bits (119), Expect(2) = 5e-10
 Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
 Frame = +1

Query: 274 VSCKEKVYLFFFGGVTVVDVYD--SRASIKTSEMKWNECSIPEAIRKTNF---YVESCGE 438
           V C  K+Y+F +   + + V D  ++  +    +     +I   +   NF   +VE+ GE
Sbjct: 160 VYCNGKLYVFSYLTNSAIFVLDEINKGGVVLRSLNVEYQNIMSQLESLNFRRCFVEASGE 219

Query: 439 IFQVNQIHSMLSREIFLTFDIFKLDLSTMDWVKVESLGDRIFXXXXXXXXXXXGAELGVK 618
           I+ +N +       + +  ++ K+D S M W KVE + D +                 ++
Sbjct: 220 IYGINILLGGYDSRV-VDIEVRKIDFSRMAWEKVECVKDSVLFLDDHYSISCPEIRPEIQ 278

Query: 619 GNCVYYSIPNYTHLYRFDMDDGAITVTLP-LPNVLNWKGP---FWMVPDCK 759
           GN +Y+ + ++  LY + ++D +I++  P LP     + P   FW++PD +
Sbjct: 279 GNRLYFVLKDH-KLYSYSIEDRSISLVSPYLP-----EDPFLSFWVMPDLR 323



 Score = 41.2 bits (95), Expect(2) = 5e-10
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 24  YLFNPVSLKKIILPPL-IDNTFDVGILTYPPSDPNCVVMLFSQKKRLCTFCRIGDTKWIE 200
           +L+NP++L+KI LP L + N    G ++  P +  C ++LF        F  +GD +W E
Sbjct: 79  FLWNPLTLEKIDLPDLQVYNIISSGYISSSPRETGCKILLFVGDHPSIMFLELGDKEWTE 138


>dbj|BAD25968.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 458

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = +1

Query: 409 TNFYVESCGEIFQVNQIHSMLSREIFLTFDIFKLDLSTMDWVKVESLGDRIFXXXXXXXX 588
           TN  +ESCGE+F ++  H ++  +  +  ++ KLDLS   WVKV ++G++ F        
Sbjct: 342 TNCLLESCGELFMLSFKHPVVCAQKVVQIEVHKLDLSRRIWVKVNTIGNKAFLVECIGFG 401

Query: 589 XXXGAE-LGVKGNCVYYSIPNYTHLYRFDMDDGAITVTLP 705
               AE +G+K NC+Y+  PN   LY +DM+ G   +  P
Sbjct: 402 SSLTAEDVGLKRNCIYFVRPNDKGLYVYDMERGTTVMHNP 441


>gb|EAZ44588.1| hypothetical protein OsJ_29211 [Oryza sativa Japonica Group]
          Length = 406

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = +1

Query: 409 TNFYVESCGEIFQVNQIHSMLSREIFLTFDIFKLDLSTMDWVKVESLGDRIFXXXXXXXX 588
           TN  +ESCGE+F ++  H ++  +  +  ++ KLDLS   WVKV ++G++ F        
Sbjct: 290 TNCLLESCGELFMLSFKHPVVCAQKVVQIEVHKLDLSRRIWVKVNTIGNKAFLVECIGFG 349

Query: 589 XXXGAE-LGVKGNCVYYSIPNYTHLYRFDMDDGAITVTLP 705
               AE +G+K NC+Y+  PN   LY +DM+ G   +  P
Sbjct: 350 SSLTAEDVGLKRNCIYFVRPNDKGLYVYDMERGTTVMHNP 389


>gb|EAZ08952.1| hypothetical protein OsI_31218 [Oryza sativa Indica Group]
          Length = 406

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = +1

Query: 409 TNFYVESCGEIFQVNQIHSMLSREIFLTFDIFKLDLSTMDWVKVESLGDRIFXXXXXXXX 588
           TN  +ESCGE+F ++  H ++  +  +  ++ KLDLS   WVKV ++G++ F        
Sbjct: 290 TNCLLESCGELFMLSFKHPVVCAQKVVQIEVHKLDLSRRIWVKVNTIGNKAFLVECIGFG 349

Query: 589 XXXGAE-LGVKGNCVYYSIPNYTHLYRFDMDDGAITVTLP 705
               AE +G+K NC+Y+  PN   LY +DM+ G   +  P
Sbjct: 350 SSLTAEDVGLKRNCIYFVRPNDKGLYVYDMERGTTVMHNP 389


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