BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025610
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...    60   2e-07
gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]             57   3e-06
ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    57   3e-06
ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana] gi|...    57   3e-06
ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...    56   5e-06

>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
 Frame = -1

Query: 390 MEAVELPDEIWTKILELGIDKWILKHPDICSFSMSCKHFNNLSNQNTLWASLLILVFPDH 211
           M A E+PDEIW KI+E+G+      + D+C  S+S +    LS  ++LW  LL L FP H
Sbjct: 1   MSANEIPDEIWRKIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTH 60

Query: 210 TXXXXXXXXXXXXXXXXVYKHQLGLKIAELLSCLDVFRIKSYVT--SRRIAHCRAELMEE 37
                             ++ +   K+A     L   R +S ++   RRI    A L +E
Sbjct: 61  IVSASSSQSPSKFIYRTRFEREKERKVAAHRRAL--LRKESEISEWGRRIRELEARLSDE 118

Query: 36  QDGIQTRSI 10
            + + + S+
Sbjct: 119 AERLHSSSL 127


>gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]
          Length = 313

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -1

Query: 390 MEAVELPDEIWTKILELGIDKWILKHPDICSFSMSCKHFNNLSNQNTLWASLLILVFPDH 211
           M A E+PDE+W KILE+G+      + D+C  S+S +    LS  ++LW  LL+  FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -1

Query: 390 MEAVELPDEIWTKILELGIDKWILKHPDICSFSMSCKHFNNLSNQNTLWASLLILVFPDH 211
           M A E+PDE+W KILE+G+      + D+C  S+S +    LS  ++LW  LL+  FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|17529082|gb|AAL38751.1| unknown protein [Arabidopsis
           thaliana] gi|22136746|gb|AAM91692.1| unknown protein
           [Arabidopsis thaliana] gi|332190216|gb|AEE28337.1| F-box
           protein SKIP24 [Arabidopsis thaliana]
          Length = 274

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -1

Query: 390 MEAVELPDEIWTKILELGIDKWILKHPDICSFSMSCKHFNNLSNQNTLWASLLILVFPDH 211
           M A E+PDE+W KILE+G+      + D+C  S+S +    LS  ++LW  LL+  FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = -1

Query: 378 ELPDEIWTKILELGIDKWILKHPDICSFSMSCKHFNNLSNQNTLWASLLILVFPDHT 208
           +LPDE+W +ILE+GI    L + D+C  S+SC+  + LSN   LW+ LL   FP HT
Sbjct: 3   DLPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFP-HT 58