BLASTX nr result

ID: Coptis21_contig00025607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025607
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140402.1| PREDICTED: eukaryotic translation initiation...   116   2e-24
ref|NP_001067233.1| Os12g0607100 [Oryza sativa Japonica Group] g...   116   2e-24
ref|NP_001066299.1| Os12g0176800 [Oryza sativa Japonica Group] g...   116   2e-24
ref|NP_731994.1| eukaryotic initiation factor 2gamma, isoform C ...   116   2e-24
ref|NP_171913.1| translation initiation factor eIF-2 gamma subun...   116   2e-24

>ref|XP_004140402.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
           3-like [Cucumis sativus]
           gi|449498379|ref|XP_004160522.1| PREDICTED: eukaryotic
           translation initiation factor 2 subunit 3-like [Cucumis
           sativus]
          Length = 464

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGIQTVRFKNELERNITIKLGYANAKI 3
           PLSPEVISRQATINIGTIGHVAHGKSTVVKAISG+QTVRFKNELERNITIKLGYANAKI
Sbjct: 21  PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKI 79


>ref|NP_001067233.1| Os12g0607100 [Oryza sativa Japonica Group]
           gi|77556464|gb|ABA99260.1| Eukaryotic translation
           initiation factor 2 gamma subunit, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113649740|dbj|BAF30252.1| Os12g0607100 [Oryza sativa
           Japonica Group]
          Length = 464

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGIQTVRFKNELERNITIKLGYANAKI 3
           PLSPEVISRQATINIGTIGHVAHGKSTVVKAISG+QTVRFKNELERNITIKLGYANAKI
Sbjct: 21  PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKI 79


>ref|NP_001066299.1| Os12g0176800 [Oryza sativa Japonica Group]
           gi|77553812|gb|ABA96608.1| Eukaryotic translation
           initiation factor 2 gamma subunit, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113648806|dbj|BAF29318.1| Os12g0176800 [Oryza sativa
           Japonica Group] gi|215697226|dbj|BAG91220.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 464

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGIQTVRFKNELERNITIKLGYANAKI 3
           PLSPEVISRQATINIGTIGHVAHGKSTVVKAISG+QTVRFKNELERNITIKLGYANAKI
Sbjct: 21  PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKI 79


>ref|NP_731994.1| eukaryotic initiation factor 2gamma, isoform C [Drosophila
           melanogaster] gi|23171335|gb|AAN13641.1| eukaryotic
           initiation factor 2gamma, isoform C [Drosophila
           melanogaster] gi|46409120|gb|AAS93717.1| RE71279p
           [Drosophila melanogaster] gi|220951148|gb|ACL88117.1|
           Su(var)3-9-PC [synthetic construct]
           gi|220959686|gb|ACL92386.1| Su(var)3-9-PC [synthetic
           construct]
          Length = 467

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGIQTVRFKNELERNITIKLGYANAKI 3
           PLSPEVISRQATINIGTIGHVAHGKSTVVKAISG+QTVRFKNELERNITIKLGYANAKI
Sbjct: 21  PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKI 79


>ref|NP_171913.1| translation initiation factor eIF-2 gamma subunit [Arabidopsis
           thaliana] gi|13549162|gb|AAK29674.1|AF353097_1 protein
           synthesis initiation factor eIF2 gamma [Arabidopsis
           thaliana] gi|3142294|gb|AAC16745.1| Strong similarity to
           initiation factor eIF-2, gb|U37354 from S. pombe. ESTs
           gb|T41979, gb|N37284 and gb|N37529 come from this gene
           [Arabidopsis thaliana] gi|20260148|gb|AAM12972.1| strong
           similarity to initiation factor eIF-2, gb|U37354 from S
           [Arabidopsis thaliana] gi|25083696|gb|AAN72106.1| strong
           similarity to initiation factor eIF-2, gb|U37354 from S
           [Arabidopsis thaliana] gi|332189544|gb|AEE27665.1|
           translation initiation factor eIF-2 gamma subunit
           [Arabidopsis thaliana]
          Length = 465

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 179 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGIQTVRFKNELERNITIKLGYANAKI 3
           PLSPEVISRQATINIGTIGHVAHGKSTVVKAISG+QTVRFKNELERNITIKLGYANAKI
Sbjct: 22  PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKI 80


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