BLASTX nr result
ID: Coptis21_contig00025596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00025596
(260 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat... 124 1e-26
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 124 1e-26
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,... 122 2e-26
ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago ... 122 3e-26
ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat... 122 4e-26
>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 124 bits (310), Expect = 1e-26
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LS +QACS LGYLEKG+ HHKL++ GL KD Y+DTALTDMY+KCG+L MA VFD M E
Sbjct: 508 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE 567
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+S+VSWS MIAGYG HG ++ ISLF
Sbjct: 568 RSIVSWSVMIAGYGMHGQINATISLF 593
Score = 68.2 bits (165), Expect = 7e-10
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S++ AC + + + G + H ++ +G DF V AL DMYAKCG + A ++F+ + EK
Sbjct: 409 SSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEK 467
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
S+V+W++MI G+ +G AI+LF
Sbjct: 468 SLVTWNSMICGFSQNGYSVEAITLF 492
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LS +ACS LG L GR H +V +E + ++ +L MY K GDL A+R+F+ +
Sbjct: 205 LSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPC 264
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+ W+ MI+ Y GC A+++F
Sbjct: 265 RMTAPWTPMISCYNQSGCFQEALNVF 290
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S ++ACS G L G + H +++ G E D V+T+L MY + L A + FDTM +
Sbjct: 105 SVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIR 164
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
VV+WS+++ + +G + +F
Sbjct: 165 DVVAWSSIVLNFVQNGQASEGLDMF 189
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 124 bits (310), Expect = 1e-26
Identities = 58/86 (67%), Positives = 69/86 (80%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LS +QACS LGYLEKG+ HHKL++ GL KD Y+DTALTDMY+KCG+L MA VFD M E
Sbjct: 705 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE 764
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+S+VSWS MIAGYG HG ++ ISLF
Sbjct: 765 RSIVSWSVMIAGYGMHGQINATISLF 790
Score = 68.2 bits (165), Expect = 7e-10
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S++ AC + + + G + H ++ +G DF V AL DMYAKCG + A ++F+ + EK
Sbjct: 606 SSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEK 664
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
S+V+W++MI G+ +G AI+LF
Sbjct: 665 SLVTWNSMICGFSQNGYSVEAITLF 689
>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 800
Score = 122 bits (307), Expect = 2e-26
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
L+A+QACS +G+LEKG+ HHKL+ G++KD ++DTAL DMYAKCGDL +A RVFD+M E
Sbjct: 506 LTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSE 565
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+SVVSWSAMI G G HG +D AISLF
Sbjct: 566 RSVVSWSAMIGGCGMHGDIDAAISLF 591
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/85 (35%), Positives = 51/85 (60%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S ++AC+ G L+ G H +++ GL+ D V+T+L MY G L A++VFD M +
Sbjct: 104 SVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTR 163
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
+VSWS++I+ Y ++G + +F
Sbjct: 164 DLVSWSSIISCYVDNGESSEGLEMF 188
Score = 61.6 bits (148), Expect = 6e-08
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S++ AC+ +G L G + H + + +F V +L DMY+KCG + +A +FD + K
Sbjct: 407 SSISACANVGLLWLGHQIHGYAIKRHILDEF-VQNSLIDMYSKCGHVDLAYLIFDRIQSK 465
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
SVV+W++MI G+ G AI LF
Sbjct: 466 SVVAWNSMICGFSQIGNSLEAIRLF 490
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/86 (32%), Positives = 45/86 (52%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LS AC LG+L + H ++ +E ++ AL MY++C D A+R+F M
Sbjct: 204 LSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFN 263
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+S+ SW+AMI+ Y A+ +F
Sbjct: 264 RSIASWTAMISCYNRSRWFKQALQVF 289
>ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein
MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 122 bits (306), Expect = 3e-26
Identities = 55/86 (63%), Positives = 71/86 (82%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LSA+QACS LGYL+KG+ HHK++++G + D Y+DTAL DMYAKCGDL AQ+VFD+++E
Sbjct: 510 LSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVE 569
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
KSVVSWS MIA +G HG ++ A SLF
Sbjct: 570 KSVVSWSTMIAAHGIHGQINAATSLF 595
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S++ A + G ++ G++ H ++ G +F V +L DMY+KCG A +F+ + K
Sbjct: 411 SSISASASSGSIQFGQQIHGHVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTIFNKIKHK 469
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
S+V+W+ MI G+ +G A+SLF
Sbjct: 470 SIVAWNCMICGFSQNGISVEALSLF 494
Score = 58.2 bits (139), Expect = 7e-07
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LS +AC +G L + H ++ G+ D + +L MY++CG L A+R+F+ + +
Sbjct: 207 LSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDD 266
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
+S W++MI+ Y + C + A+ +F
Sbjct: 267 RSTSCWTSMISAYNQNECFEEALDVF 292
>ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 122 bits (305), Expect = 4e-26
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = -2
Query: 259 LSAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLE 80
LSA+QACS GYL KG+ HHKLV+SG++KD Y+DTAL DMYAKCGDL AQ VF++M E
Sbjct: 510 LSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPE 569
Query: 79 KSVVSWSAMIAGYGNHGCLDNAISLF 2
KSVVSWSAMIA YG HG + A +LF
Sbjct: 570 KSVVSWSAMIAAYGIHGQITAATTLF 595
Score = 64.3 bits (155), Expect = 1e-08
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S++ AC+ + G++ H + G +F V +L DMY+KCG + +A +FD + EK
Sbjct: 411 SSISACAGASSVRFGQQIHGHVTKRGFADEF-VQNSLMDMYSKCGFVDLAYTIFDKIWEK 469
Query: 76 SVVSWSAMIAGYGNHGCLDNAISLF 2
S+V+W+ MI G+ +G A+ LF
Sbjct: 470 SIVTWNCMICGFSQNGISVEALKLF 494
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = -2
Query: 256 SAVQACSPLGYLEKGRRFHHKLVISGLEKDFYVDTALTDMYAKCGDLPMAQRVFDTMLEK 77
S ++A S +G L GR+ H ++V +GL D + T+L MY + G L A++VFD + +
Sbjct: 107 SVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVR 166
Query: 76 SVVSWSAMIAGYGNHG 29
+VSWS+++A Y +G
Sbjct: 167 DLVSWSSVVACYVENG 182