BLASTX nr result

ID: Coptis21_contig00025527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025527
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002522118.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu...   125   3e-27
ref|XP_004150262.1| PREDICTED: thymocyte nuclear protein 1-like ...   125   5e-27
gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo]        123   1e-26

>ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/106 (59%), Positives = 81/106 (76%)
 Frame = -2

Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSDKDEGAVDVKAVGVMRRPVDXXXXXX 314
           +K+MKL DLCFFYHSGS +RR+VGVV+V +EWY +  EG VDVKAVG MRRP+D      
Sbjct: 43  LKAMKLNDLCFFYHSGSNARRVVGVVTVVREWYDEGGEGVVDVKAVGEMRRPLDLKELKG 102

Query: 313 XXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNE 176
                GF +F+QPRLSVVPVSK+VW+R+CE+GGG+  D +D  G++
Sbjct: 103 DEGLKGFQLFRQPRLSVVPVSKEVWERVCELGGGFEGDGKDDGGDD 148


>ref|XP_002522118.1| conserved hypothetical protein [Ricinus communis]
           gi|223538717|gb|EEF40318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = -2

Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYS-DKDEGAVDVKAVGVMRRPVDXXXXX 317
           +K+M + DLCFFYHSG+K+RR+VGVV+V KEWYS D DE  VDVKAVG MRRPVD     
Sbjct: 43  LKAMNIKDLCFFYHSGAKARRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMK 102

Query: 316 XXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNEE 173
                  F +F+QPRLSVVPV K+VW+R+CE+G G+  D  D N  ++
Sbjct: 103 NDDGLSDFALFRQPRLSVVPVPKEVWERVCELGDGFEGDGNDDNQEQD 150


>ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula]
           gi|355511977|gb|AES93600.1| Thymocyte nuclear protein
           [Medicago truncatula]
          Length = 146

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/109 (61%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = -2

Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSDK-DEGAVDVKAVGVMRRPVDXXXXX 317
           +KSM L DLCFFYHSG KSRRIVGVVSV KEWY+D  D+GAVDVKAVG MRR VD     
Sbjct: 43  LKSMSLNDLCFFYHSGPKSRRIVGVVSVVKEWYTDNDDDGAVDVKAVGEMRRVVD---LK 99

Query: 316 XXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNEEA 170
                  FV+ KQPRLSVVPV   +WD +C++GGGY  D     GN E+
Sbjct: 100 EMKHLKDFVLLKQPRLSVVPVPHVIWDTICDLGGGYHGD-----GNHES 143


>ref|XP_004150262.1| PREDICTED: thymocyte nuclear protein 1-like [Cucumis sativus]
           gi|449484382|ref|XP_004156866.1| PREDICTED: thymocyte
           nuclear protein 1-like [Cucumis sativus]
          Length = 157

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 3/110 (2%)
 Frame = -2

Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSD-KDEGAVDVKAVGVMRRPVD-XXXX 320
           +KSMKLGD CFFYHSG+K+RR+VGVV+V +EWYS   DE  VDV+AVG MR PVD     
Sbjct: 48  LKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMK 107

Query: 319 XXXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGY-GFDDEDLNGNEE 173
                   F +F+QPRLSVVPV+K++WD++CE+GGG+ G   E  +G+EE
Sbjct: 108 KRMEGMKNFALFRQPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE 157


>gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 201

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
 Frame = -2

Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSD-KDEGAVDVKAVGVMRRPVD-XXXX 320
           +KSMKLGD CFFYHSG+K+RR+VGVV+V +EWYS  +DE  VDV+AVG MR PVD     
Sbjct: 93  LKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMK 152

Query: 319 XXXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFD 200
                   F +F+QPRLSVVPV+K++WD++CE+GGG+  D
Sbjct: 153 KGMEGMKNFALFRQPRLSVVPVAKEIWDKICELGGGFEGD 192


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