BLASTX nr result
ID: Coptis21_contig00025527
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025527 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2... 136 2e-30 ref|XP_002522118.1| conserved hypothetical protein [Ricinus comm... 129 2e-28 ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu... 125 3e-27 ref|XP_004150262.1| PREDICTED: thymocyte nuclear protein 1-like ... 125 5e-27 gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo] 123 1e-26 >ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1| predicted protein [Populus trichocarpa] Length = 151 Score = 136 bits (342), Expect = 2e-30 Identities = 63/106 (59%), Positives = 81/106 (76%) Frame = -2 Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSDKDEGAVDVKAVGVMRRPVDXXXXXX 314 +K+MKL DLCFFYHSGS +RR+VGVV+V +EWY + EG VDVKAVG MRRP+D Sbjct: 43 LKAMKLNDLCFFYHSGSNARRVVGVVTVVREWYDEGGEGVVDVKAVGEMRRPLDLKELKG 102 Query: 313 XXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNE 176 GF +F+QPRLSVVPVSK+VW+R+CE+GGG+ D +D G++ Sbjct: 103 DEGLKGFQLFRQPRLSVVPVSKEVWERVCELGGGFEGDGKDDGGDD 148 >ref|XP_002522118.1| conserved hypothetical protein [Ricinus communis] gi|223538717|gb|EEF40318.1| conserved hypothetical protein [Ricinus communis] Length = 150 Score = 129 bits (324), Expect = 2e-28 Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 1/108 (0%) Frame = -2 Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYS-DKDEGAVDVKAVGVMRRPVDXXXXX 317 +K+M + DLCFFYHSG+K+RR+VGVV+V KEWYS D DE VDVKAVG MRRPVD Sbjct: 43 LKAMNIKDLCFFYHSGAKARRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMK 102 Query: 316 XXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNEE 173 F +F+QPRLSVVPV K+VW+R+CE+G G+ D D N ++ Sbjct: 103 NDDGLSDFALFRQPRLSVVPVPKEVWERVCELGDGFEGDGNDDNQEQD 150 >ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula] gi|355511977|gb|AES93600.1| Thymocyte nuclear protein [Medicago truncatula] Length = 146 Score = 125 bits (315), Expect = 3e-27 Identities = 67/109 (61%), Positives = 76/109 (69%), Gaps = 1/109 (0%) Frame = -2 Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSDK-DEGAVDVKAVGVMRRPVDXXXXX 317 +KSM L DLCFFYHSG KSRRIVGVVSV KEWY+D D+GAVDVKAVG MRR VD Sbjct: 43 LKSMSLNDLCFFYHSGPKSRRIVGVVSVVKEWYTDNDDDGAVDVKAVGEMRRVVD---LK 99 Query: 316 XXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFDDEDLNGNEEA 170 FV+ KQPRLSVVPV +WD +C++GGGY D GN E+ Sbjct: 100 EMKHLKDFVLLKQPRLSVVPVPHVIWDTICDLGGGYHGD-----GNHES 143 >ref|XP_004150262.1| PREDICTED: thymocyte nuclear protein 1-like [Cucumis sativus] gi|449484382|ref|XP_004156866.1| PREDICTED: thymocyte nuclear protein 1-like [Cucumis sativus] Length = 157 Score = 125 bits (313), Expect = 5e-27 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 3/110 (2%) Frame = -2 Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSD-KDEGAVDVKAVGVMRRPVD-XXXX 320 +KSMKLGD CFFYHSG+K+RR+VGVV+V +EWYS DE VDV+AVG MR PVD Sbjct: 48 LKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVDDEVVVDVEAVGEMREPVDLKEMK 107 Query: 319 XXXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGY-GFDDEDLNGNEE 173 F +F+QPRLSVVPV+K++WD++CE+GGG+ G E +G+EE Sbjct: 108 KRMEGMKNFALFRQPRLSVVPVTKEIWDKICELGGGFEGDGTEGGDGSEE 157 >gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo] Length = 201 Score = 123 bits (309), Expect = 1e-26 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 2/100 (2%) Frame = -2 Query: 493 MKSMKLGDLCFFYHSGSKSRRIVGVVSVTKEWYSD-KDEGAVDVKAVGVMRRPVD-XXXX 320 +KSMKLGD CFFYHSG+K+RR+VGVV+V +EWYS +DE VDV+AVG MR PVD Sbjct: 93 LKSMKLGDRCFFYHSGAKARRVVGVVAVAREWYSSVEDEVVVDVEAVGEMREPVDLKEMK 152 Query: 319 XXXXXXXGFVMFKQPRLSVVPVSKKVWDRLCEIGGGYGFD 200 F +F+QPRLSVVPV+K++WD++CE+GGG+ D Sbjct: 153 KGMEGMKNFALFRQPRLSVVPVAKEIWDKICELGGGFEGD 192